Gene detail information of Glyur000185s00016460 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66890.1 | 3.00E-10 | |
| NR | XP_004492961.1 | 7.14E-87 | PREDICTED: uncharacterized protein LOC101490459 [Cicer arietinum] |
| trEMBL | tr|G7KV59|G7KV59_MEDTR | 2.00E-61 | 50S ribosomal-like protein, putative {ECO:0000313|EMBL:AES80590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00185 | 143272 | 143751 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.140 |
| SRR1783600 | control | 35.503 |
| SRR1783602 | moderate drought stress | 27.808 |
| SRR1811619 | moderate drought stress | 28.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.481 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.914 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.907 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.872 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.088 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.204 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.964 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.946 |
| SRR2868004 | Drought Stress (root) | 12.858 |
| SRR2967015 | Control (root) | 20.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.319 |
| SRR9715740 | Leaf | 9.021 |
| SRR9715741 | Leaf | 7.977 |
| SRR9715739 | Root | 28.101 |
| SRR9715742 | Root | 20.254 |
| SRR9715743 | Root | 17.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.070 |
| SRR8749028 | MeJA induced 9h | 10.159 |
| SRR8749029 | MeJA induced 9h | 10.902 |
| SRR8749030 | Uninduced | 3.889 |
| SRR8749031 | Uninduced | 3.397 |
| SRR8749032 | Uninduced | 17.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.150 |
| SRR8400027 | Control - Root | 24.712 |