Gene detail

Gene detail information of Glyur000185s00016457.5

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G38280.1	4.00E-116	PR5-like receptor kinase
NR	AES80585.2	0	receptor-like kinase [Medicago truncatula]
COG	YP_001958461.1	4.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|D7SFH9\|GPDL2_ARATH	1.00E-118	Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBL	tr\|G7KUD5\|G7KUD5_MEDTR	0	Receptor-like kinase {ECO:0000313\|EMBL:AES80585.2}

Sequence

Transcript Sequence

>Glyur000185s00016457.5
ATGGGCACACGTAAGAGGTATTTTAGTATGGTACGAGAGAGGATTTTCAGGAAAGAAAGAAAATTTGTTGACAACAACGTGGAAGNTTTCATGCAGAGTTATAACTTGTTAGTGCCAAAGCGATACAGTTATGCAGAAATTAAAAGGATCACAAACTCATTTCGTGACAAGTTAGGTCAAGGAGGATACGGTGTTGTGTACAAAGCAAGCTTACCTGATGGTCGTCATGTGGCAGTGAAAGTAATAAGTGAGTCTAAGGGAAATGGTGAAGAATTCATAAATGAAGTTGCTAGCATTAGCAGAACATCACATATGAACATTGTCTCACTTTTGGGTTTTTGTTATGAGAGGAACAAAAGAGTACTAATATATGAATTCATGCCCAATGGATCATTGGATAAGTTCATCTATAGAGGTGGGTTCCCAAGTGTTATATGTAATTTGGATTGGAACACATTGTTCCAAATTGCAATTGGCATTGCTNGAGGTCTAGAATACTTGCATCAAGGATGTACTTCAAGGATTTTGCATCTCGATATCAAACCCCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGATTGGCTAAAATATGCCAAAAGAAGGAAAGCATTGTATCCATGCAAGGAACAAGAGGAACTATAGGGTACATAGCACCTGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCACAGGTCTGATGTATANAGTTATGGCATGCTGATTCTTGAAATGATTGGAGGAAGAAAGAATCATGATAGTGGAGGGTCACATACCACTGAAATGTACTTTCCAGACTGGATTTATAGGGATCTTGAGCAAGGTCATACTCCTGTAAACTGTTTAGCAATGTCAGAGGAAGAAAATGATATGGTAAGGAAGATTACTATGGTGAGTCTATGGTGCATTCAAATGAATCCGTCAGATAGGCCATCAATGAGTAAACAATTTGTCCGAGACAAATTCAACGAAGTCTTCTGCCACATACTAGGCACAAGAGTAACTATAGGGTGTATAGCACCAGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCATAGATCTGATGTATATAGTTATGGCATGCTGATTGTTGAAATGATTGGAGGAAGGAAGAATTATGATAGTGGAGGGTCACATACCACTGAAATGTACTTTCCAGACTGGATTTATAGGGATCTTGAGCAAGGTCATGCTCCTGTAAACTGTTTGGCAATGTCAGAGGAAGAAAATGATATGGTAAGGAAGATTACTATGGTGAGTCTATGGTGCATTCAAATGAATCCGTCAGATAGGNCATCAATGAGTAAAGTAATAGAAATGCTACAAAGACCACTTCAGTCAGTGCCATATCCTCCGAAGCCCGCCTTGTATTCTCCTGAAAGGCCATCNTTACAAATTTCATATGTTTCTTCTAGCAATTTGTCCGAGACAAATTCAACAAGCTTACAGGAGAATGGTTCCTTAAAATCAATTCANCAAACATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00185	79358	133210	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000185s00016457.5	PF00069.20	Pkinase	56	321	6.70E-46
Glyur000185s00016457.5	PF07714.12	Pkinase_Tyr	338	448	4.60E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.453
SRR1783600	control	0.467
SRR1783602	moderate drought stress	0.448
SRR1811619	moderate drought stress	0.425

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.501
DRR006520	Root Summer glycyrrhizin high producing strain	0.515
DRR006521	Root Winter glycyrrhizin high producing strain	0.053
DRR006522	Root Winter glycyrrhizin high producing strain	0.053
DRR006523	Root Summer glycyrrhizin low producing strain	0.472
DRR006524	Root Summer glycyrrhizin low producing strain	0.452
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.322
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.323

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.495
SRR2868004	Drought Stress (root)	0.365
SRR2967015	Control (root)	0.539

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.659
SRR9715740	Leaf	0.844
SRR9715741	Leaf	1.575
SRR9715739	Root	5.820
SRR9715742	Root	28.553
SRR9715743	Root	23.182

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.552
SRR8749028	MeJA induced 9h	0.200
SRR8749029	MeJA induced 9h	0.513
SRR8749030	Uninduced	0.353
SRR8749031	Uninduced	0.166
SRR8749032	Uninduced	0.201

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.689
SRR8400027	Control - Root	6.082