Gene detail

Gene detail information of Glyur000185s00016451.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G66980.1	4.00E-93	suppressor of npr1-1 constitutive 4
NR	KEH29536.1	1.29E-172	receptor-like kinase, putative [Medicago truncatula]
COG	YP_001958461.1	6.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|D7SFH9\|GPDL2_ARATH	7.00E-106	Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBL	tr\|A0A072UJD1\|A0A072UJD1_MEDTR	5.00E-173	Receptor-like kinase, putative {ECO:0000313\|EMBL:KEH29536.1}

Sequence

Transcript Sequence

>Glyur000185s00016451.1
TTGACATCCTTGTCTCAACTTGAGTTCCTGGATTTGTCCAATAATAACCTCTCCGGACAAGTTCCCAATTTTTCATCCAAGGTGACGTTATTTACCAACGGAAATGTTAATTTGGTTGGGCCTTCTCAAGGAGCCATAGATCCATCACCTGTTTCGGGTCATCCAGCAAGTGGAGGCTCATCTAAAACACCAATTGTTAAACCTGTTTTGATAGCAGTGGCATCAGTGNTGAGTGCTGGAGTTGTAATACTTATTGTTATTATCGCCAAACGTAAGAGGTATTTTAGTTTGGTACAGGAGAGGATTTTCAGGAAAGGAAGAAAATTTGTTGACCACAATGTGGAGGCATTCATAGGAAGTGATAAGCTATCGATGCCAAAGCAATACAATTATGCAGAAGTGAAAAGGTTCACAAACTCATTCCGTGATAAGTTGGGTCGAGGAGGATATGGTGATGTGTACAAAGCATGCTTACCAGATGGTCGTCAAGTGGCAGTGAAAGTAATAAGCGAGTCCAGGGGAAATGGTGAAGAATTCATAAATGAAGTTGCTAGCATTAGCAAAACGTCACATGTGAACATTGTCTCACTTTTGGGTTTTTGTTATGAGATGAACAAAAGAGCACTAATATATGAATTCATGTCGAATGGTTCATTGGATAAGTACATCTATAAAAGTGGGTTTCCAAACGCTATCTGTAATTTGGATTGGGACACATTGTTCAAAATTGCAATTGGCATTGCTCAAGGACTAGAATACTTGCATCACGGATGTACTTCAAGGATTTTGCATCTCGATATCAAACCCCAAAACATTCTTTTGGATGAAGATTTTTGCCCCAAAATCTCTGATTTTGGATTGGCTAAAATATGCCAAAAGAAGGAAAGTATTGTATCCATGCAAGGCACAAGAGGAACTATAGGGTACATAGCACCAGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCACAAGTCTGATGTATACAGTTATGGCATGCTGATTCTTGAAATGATTGGAGGAAGAAAGAATCATGATAGTGGAGGGTCACATACCACTGAAATGTACTTTCCAGACTGGATTTATAGGATCTTGAGCAAGGTCATACTCCTGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00185	60397	63077	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000185s00016451.1	PF00069.20	Pkinase	143	346	5.70E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.497
SRR1783600	control	1.316
SRR1783602	moderate drought stress	0.128
SRR1811619	moderate drought stress	0.218

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.405
DRR006520	Root Summer glycyrrhizin high producing strain	0.874
DRR006521	Root Winter glycyrrhizin high producing strain	0.033
DRR006522	Root Winter glycyrrhizin high producing strain	0.104
DRR006523	Root Summer glycyrrhizin low producing strain	2.236
DRR006524	Root Summer glycyrrhizin low producing strain	1.599
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.375
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.263

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.488
SRR2868004	Drought Stress (root)	8.563
SRR2967015	Control (root)	4.955

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.043
SRR9715740	Leaf	0.594
SRR9715741	Leaf	11.938
SRR9715739	Root	0.468
SRR9715742	Root	1.881
SRR9715743	Root	1.997

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	29.192
SRR8749028	MeJA induced 9h	17.786
SRR8749029	MeJA induced 9h	30.835
SRR8749030	Uninduced	18.367
SRR8749031	Uninduced	10.526
SRR8749032	Uninduced	12.049

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.733
SRR8400027	Control - Root	11.745