Gene detail information of Glyur000184s00008209 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007051831.1 | 6.48E-27 | Uncharacterized protein TCM_005350 [Theobroma cacao] |
| trEMBL | tr|A0A061E133|A0A061E133_THECC | 2.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:EOX95988.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00184 | 252619 | 254038 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.791 |
| SRR1783600 | control | 40.306 |
| SRR1783602 | moderate drought stress | 43.284 |
| SRR1811619 | moderate drought stress | 37.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 71.774 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 67.902 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 47.037 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.100 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.563 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.627 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.566 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 102.006 |
| SRR2868004 | Drought Stress (root) | 75.545 |
| SRR2967015 | Control (root) | 62.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.902 |
| SRR9715740 | Leaf | 57.690 |
| SRR9715741 | Leaf | 47.162 |
| SRR9715739 | Root | 6.198 |
| SRR9715742 | Root | 24.073 |
| SRR9715743 | Root | 18.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.004 |
| SRR8749028 | MeJA induced 9h | 21.888 |
| SRR8749029 | MeJA induced 9h | 28.000 |
| SRR8749030 | Uninduced | 15.590 |
| SRR8749031 | Uninduced | 7.483 |
| SRR8749032 | Uninduced | 7.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.098 |
| SRR8400027 | Control - Root | 67.650 |