Gene detail

Gene detail information of Glyur000184s00008203.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G23850.1	2.00E-139	Arabidopsis thaliana protein of unknown function (DUF821)
NR	XP_006583309.1	0	PREDICTED: O-glucosyltransferase rumi homolog isoform X2 [Glycine max]
trEMBL	tr\|K7L076\|K7L076_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G07910.2}

Sequence

Transcript Sequence

>Glyur000184s00008203.1
ATGTATTCACTGAGTAATTACTTGTTACAGTATAGATATATATACATAACTATGTTATTTTTCTTTCAGTCCAAAATAACNAGCACTAATATTCTCAAGACAATCATAGTCTTCAATAAGCAACAAGCCCAATTCCCACTGAACTGCATCAATGGATCCCCAGCAGCAACCTGCCCAGCAGCATACTACCCAACAAAATCTGATCTTGATGATTCATCATCATCATCATCAGCTACATCATGTCCAGAGTACTTCAGATGGATCCATGAAGATCTAAAACCATGGGAGAGCACAGGAATCACAAGGGACATGGTGGAAAGAGGCAAGAACATTTCACACTTTAGGCTTGTGGTTGTGAATGGAAAGGCCTATGTAGAGAAGTATGCCAAGTCCTTTCAGACAAGGGATGTGTTCACAATATGGGGAATCCTACAACTCCTAAGGTTGTACCCAGGAAAGATACCAGATTTGGAGCTGGTGTTTGAGTGTGGGGATAAGACTGTTGTGGACAAAAGTGCTTACCAAGGACCACATGCCATGTCACCTCCACCTATTTTCCATTATTGTGGAGAGGAAAATTCTTATGACATTGTCTTCCCTGATTGGACCTTCTGGGGTTGGGCTGAGCTCAACATAAGACCATGGGAAACAACATTAAACAATATACAAGAAGGCAACAAGTTGGTCAAATGGAAGGATAGGGTACCCTATGCTTTTTGGAAGGGCAATCCAGAAGTATCTAAGATTAGGAAAGAACTCATCAAGTGCAACACCTCAGACCAACATGATTGGAATGCCCGAATATATAACGTACAATGGAAAGAGGAGAAATCGAAAAATTTCCAGGACACAAAACTAGAAAACCAATGTACTTATAGGTACAAGATTTATGCAGAAGGGGCCACTTGGTCTGTGAGTGAAAAGTACATAATAGCATGTGACTCCATGACCATGTTCATAGAGCCTAGATACTATGACTTCTTTACAAGAAGCATGATACCTTTGCAGCACTACTGGCCTATCAGTGCCAAAAACATGTGTGAAGAGATTAAGTTTGGAGTGGACTGGGGCAATGCTCACCTTGACAGTGCACAGGCGATTGGGAAAGGAGGAACCGACTACATCATAGAGAATTTGAGGATGAAGTTTGTTTATGATTATATGTTTTATCTATTAAATAGGTATGCAAGTCTCTTGAGATTCAAACCAACCATACCAGAAGGAGCAGTTGAGATTTGTTCNGAAAGTATGGCTTGTACCCTGAAAGGTGCAAGGAAGCATTTTATGGTTGAGTCCATGGTGTTGTCACCAAGTGATACACCTCCATGTACAATGCCTCCTCCTCATACAACTGAAACTCTCCACCAGTTTNTACAGAAAAAGGAGAATCTACTTGGGCAAGTCAAGACAAGGAAAGTGAATAAAAAGCTATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00184	217330	220274	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT90

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000184s00008203.1	PF05686.7	Glyco_transf_90	77	470	1.20E-179

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.223
SRR1783600	control	0.284
SRR1783602	moderate drought stress	0.201
SRR1811619	moderate drought stress	0.182

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.012
DRR006520	Root Summer glycyrrhizin high producing strain	0.074
DRR006521	Root Winter glycyrrhizin high producing strain	0.112
DRR006522	Root Winter glycyrrhizin high producing strain	0.151
DRR006523	Root Summer glycyrrhizin low producing strain	0.230
DRR006524	Root Summer glycyrrhizin low producing strain	0.111
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.040
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.309
SRR2868004	Drought Stress (root)	12.098
SRR2967015	Control (root)	13.253

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.002
SRR9715740	Leaf	0.044
SRR9715741	Leaf	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.041
SRR9715743	Root	0.043

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.118
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.160
SRR8749032	Uninduced	0.039

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.742
SRR8400027	Control - Root	1.386