Gene detail

Gene detail information of Glyur000184s00008186

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G01790.1	0	K+ efflux antiporter 1
NR	XP_003529954.1	0	PREDICTED: K(+) efflux antiporter 2, chloroplastic-like isoform X1 [Glycine max]
COG	YP_004985427.1	2.00E-115	glutathione-regulated potassium-efflux system (K(+)/H(+) antiporter) [Azospirillum brasilense Sp245]
Swissprot	tr\|O65272\|KEA2_ARATH	0	K(+) efflux antiporter 2, chloroplastic
trEMBL	tr\|K7L085\|K7L085_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G08031.1}

Sequence

Transcript Sequence

>Glyur000184s00008186.1
CATTTTCCCACTTTCTGTTCNGAAGCTGCATATTCCGTTTCCATCGCTTCGAAATGAATTGAGGAGTGGTTTCTGTATGAGTGTTTGGTTTTGGAATAAGAAAAAATGGATATAGCTTTTAGTATACCACAGTCAAAAGTGGTATTCGATGGTTTCGGTTCTTGCATTGTGTTTGGAGGTAGAGGTTTTGGTTGTGCTTTTCTCGGAAACTCGAGGACTACTCTGAAAGCTCGTTTTAGTGGGATGAACAAGATTGGTAGTAGTAGTNGTAGGAGTGATTCAAGAGTTGTTTGTGTAAGAGAGTTCAACTTCAATGTTTCAAATGTGAAGTGGAGTTTATCGTGTAAGAGTAGTGATAACCTTTTCAGGGGAAATAGGGGAATTCGGTCAAAGTGTCAGGGTGATGATTCTTTAGCATATGTCAATGGCAATGGCCGAAATTTTGATAAGGGGGAAGGTAAGGGTGAGGACTCTGATTTGGGGTCCATTTCCAATGCTGAATTGAGCGAACCTTTGGGAGGAGGAGAAGAAGAAGAAGAAGGGCAAGGAGAGAGGAGGAATGATGTTGGGGGTCAAGTAGAAGTGGAGGTGAAAAATGTGGATGAATTGAAGGAACTGTTGCAAAAGGCCTTGAAAGAACTAGAATCTGCTCGAGTAAATAGTATCATGTTTGAGGAAAAGGTTAAAAAGATATCGGAGGCCGCGATTTCCTTGCAGGATGAAGCAGCAAGTGCTTGGAATGATGTTAATTCTATACTTGACATAATCCAAGAAATCGTGGGTGAAGAATTTTTTGCCAAAGAAGCTGTTCAAAATGCAACAATGGCTCTNTCTTTAGCTGAGGCAAGGCTTCAAGTGGCCGTTGAATCTTTGGAGGTTGCAAATGAAGATTACAGTTCCCCACAAGGTTCTAATGAGGGTAATGGTGATAAAGATATAGTGCAAGAGGAGAAAGAACTTGTGGTTGCTCAGGAAGACATCAAGGAATGTCAGACAAATTTAGCGAATTGCGAGGCGGAGCTAAGGCGCTTGCAAAGTAGAAAGGAGGAGTTGCAGGATGAAGTGAACAGGTTGCATGAAATTGCAGAAAAGGCACAGATGGATGCAGTGAAAGCGGAGGAGGATGTCACAAACATAATGCTTTTAGCGGAGCAAGCTGTTGCNTTTGAACTTGGGGCTGCACAACGTGTGAATGATGCAGAAATTGCATTGCTGAGAGCAGACAAGTCTGTCTCTAGCGTTAATGACGATACCACAGACGCTTTACCAGTACAGGATGTTGTGGCTGTCCCTGAGGAGGAGNAAGTGGTTCAACATTTTTCTGGTGATGATGCTGTTAAAAGAGAGCTTGATTTCTCAAGTAATGATGAGTCTTTGCTTGCCATGCAATCACCAGAGGTGCTATATAATAAAACCAGCCAAGATTCAGAAGACACAACACAGTCTGATTATCTGAGTGATCACGAAAATGGACAGTTAAGCTTAGACTCTTCTAAAGAAGCTGAAATCGAAGTAGAGAAGTCAAAGAATGTAGTTCAAACAAAAAAACAGGAAATGCAGAAGGATTTGACTAGAGATAATTCACCATTTGCTCCCAAGACATTATTGAAGAAGTCTTCCCGATTTTTTCCTGCATCGTTTTTCTCTTTTACAGCAGATGAGACTGATTACTCACCGGCATCAGTTTTCCATGGTCTTGTGGAGTCTGCACAGAAGCAGTTACCCAANCTGGTTGTTGGGTTATTATTAATTGGAGCAGGGGTTTCCTTCTATGCTAATAAAGCAGAGAGGAGTGCTCAGCTGCTTCAGCAGCCAGAAGTCATTACAACCACTGTTGAAGAAGTTTCCTCAAGTGCAAAGCCTCTGGTTAGACAACTTCAGGAACTCCCCAAGAGAATTAAGAAAATTATTGCGTCATTACCTGATCAAGAGGTGAATGACGAGGAAGCCTCCCTCTTTGACATGCTCTGGCTATTACTTGCAAGTGTTATATTTGTGCCAATGTTTCAAAAAATTCCTGGAGGCAGTCCTGTTCTTGGTTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGACTCTCCATCATTCGAAATGTTCACGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTTAATATTGGCTTGGAGGTTCTGTTGACTGCTATAGTTATTGGCTTGGTGGCTCATTATGTCTGTGGCCAAGCTGGCCCAGCTGCTATNGTCATTGGGAATGGCCTAGCATTATCATCAACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAGGTGAAAGCACATCACGGCATGGACGAGCTACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTAATCCCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATCGCTGAAGCTCTTGGTCTTGCTGCTGTTAAGGCAGCAGTTGCCATCACTGTCATAATTGCAGGTGGACGATTGCTCCTTCGACCTATATATAAGCAGATTGCAGAAAATCAGAATGCTGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCAGGACTTTCCATGGCTTTGGGTGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATACCGTGGNCTTCTATTGGGCCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGGTTCAAACTTTCCGGTCATTACGGGGACACTGGGACTCTTAATATTTGGCAAGACTATCCTGGTTGCTTTGATTGGCAGAATTTTTGGTATTTCACTCATTTCTGCCATTAGAGTTGGCTTTCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCTTTGCTGTTTCTTGTTGTGGGAATTTCGATGGCCCTCACGCCATGGCTAGCTGAGGGAGGTCAGCTGATTGCTTCCCGTTTTGAGCTACACGATGTTCGAAGTCTATTACCTGTAGAAAGTGAGACAGATGATCTGCGAGATCATATCATTATTTGTGGATTTGGGCGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTTATTCCTTTCGTTGCACTAGACGTGCGAAGTGATAGAGTGGCAGTTGGGCGTTCCATGGATCTCCCTGTGTATTTTGGGGACGCTGGTAGTCGAGAGGTCCTACATAAAGTTGGGGCTGAAAGGGCAAGTGCTGCAGCAGTAACTCTAGATTCCCCTGGTGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGCATTTCCCCAAAGTGAAGACTTTTGTTCGTGCTCATGATATAGACCACGGATTGAATTTAGAAAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCGGTGCTTGCTCAGCGAAAACGAAACACACACCAAAAGAGCTTTTGTTCGCGACGGCGGCAGTTCTCGCGCCTCTCTCTCTCTCTCGTGCTTCTCTCTCCGGCGAAGACCTGCTGCCTCCCTGTTCGGCCATCTCCGGCGAGTTACACGGTTAAACTTCCTGCATCAGAGATTGCTGCAACGATAAATGAATTCAGATCCCGCCATCTGGCTGAGCTCACAGAACTATCTGAAACAAGTGGAAGTTCTCTTGGATATGGGTATAACAGAGTTATGAGCAAACCCAAATCCCAACCCCCTGATTCATTAGATGAGACCCAAGTCCCTGAAGGGGCGACATGAAGATTACCCCATATATATATATATATATATATATATATATTATATATTATATATATAATACAAAGCAGACGGCAAAAGAAAGCAGGGAACTGGAGAAAAATATAATTGTGAAAAATTGTATAGCCAGATCAGATGTTCAATTATTGTATACATCGTGTATATAAATATATCTGCATCGAAGATGCAAAATCTGTATTTTATTATTTTCTTTTACTTGTCATAAATTTTGATT

Protein Sequence

>Glyur000184s00008186.1
MDIAFSIPQSKVVFDGFGSCIVFGGRGFGCAFLGNSRTTLKARFSGMNKIGSSSXRSDSRVVCVREFNFNVSNVKWSLSCKSSDNLFRGNRGIRSKCQGDDSLAYVNGNGRNFDKGEGKGEDSDLGSISNAELSEPLGGGEEEEEGQGERRNDVGGQVEVEVKNVDELKELLQKALKELESARVNSIMFEEKVKKISEAAISLQDEAASAWNDVNSILDIIQEIVGEEFFAKEAVQNATMALSLAEARLQVAVESLEVANEDYSSPQGSNEGNGDKDIVQEEKELVVAQEDIKECQTNLANCEAELRRLQSRKEELQDEVNRLHEIAEKAQMDAVKAEEDVTNIMLLAEQAVAFELGAAQRVNDAEIALLRADKSVSSVNDDTTDALPVQDVVAVPEEEXVVQHFSGDDAVKRELDFSSNDESLLAMQSPEVLYNKTSQDSEDTTQSDYLSDHENGQLSLDSSKEAEIEVEKSKNVVQTKKQEMQKDLTRDNSPFAPKTLLKKSSRFFPASFFSFTADETDYSPASVFHGLVESAQKQLPXLVVGLLLIGAGVSFYANKAERSAQLLQQPEVITTTVEEVSSSAKPLVRQLQELPKRIKKIIASLPDQEVNDEEASLFDMLWLLLASVIFVPMFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKAIAEFGVVFLLFNIGLEVLLTAIVIGLVAHYVCGQAGPAAXVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITVIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLGSNFPVITGTLGLLIFGKTILVALIGRIFGISLISAIRVGFLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLVVGISMALTPWLAEGGQLIASRFELHDVRSLLPVESETDDLRDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRSMDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPKVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQRKRNTHQKSFCSRRRQFSRLSLSLVLLSPAKTCCLPVRPSPASYTVKLPASEIAATINEFRSRHLAELTELSETSGSSLGYGYNRVMSKPKSQPPDSLDETQVPEGAT

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00184	125254	138834	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006812 cation transport

GO:0006813 potassium ion transport

GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function
GO:0015299 solute:proton antiporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000184s00008186.1	PF00999.16	Na_H_Exchanger	622	685	7.20E-09
Glyur000184s00008186.1	PF00999.16	Na_H_Exchanger	686	973	1.70E-43
Glyur000184s00008186.1	PF02254.13	TrkA_N	1006	1119	2.70E-20
Glyur000184s00008186.2	PF00999.16	Na_H_Exchanger	622	685	6.80E-09
Glyur000184s00008186.2	PF00999.16	Na_H_Exchanger	686	973	1.50E-43
Glyur000184s00008186.2	PF02254.13	TrkA_N	1006	1119	2.60E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.885
SRR1783600	control	1.964
SRR1783602	moderate drought stress	4.058
SRR1811619	moderate drought stress	4.076

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.644
DRR006520	Root Summer glycyrrhizin high producing strain	3.797
DRR006521	Root Winter glycyrrhizin high producing strain	3.917
DRR006522	Root Winter glycyrrhizin high producing strain	3.895
DRR006523	Root Summer glycyrrhizin low producing strain	5.827
DRR006524	Root Summer glycyrrhizin low producing strain	5.983
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.176
DRR006526	Leaf Summer glycyrrhizin high producing strain	33.666

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.375
SRR2868004	Drought Stress (root)	9.631
SRR2967015	Control (root)	13.533

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.271
SRR9715740	Leaf	34.077
SRR9715741	Leaf	27.512
SRR9715739	Root	0.322
SRR9715742	Root	1.607
SRR9715743	Root	1.408

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.500
SRR8749028	MeJA induced 9h	4.376
SRR8749029	MeJA induced 9h	0.994
SRR8749030	Uninduced	2.311
SRR8749031	Uninduced	1.125
SRR8749032	Uninduced	0.753

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.625
SRR8400027	Control - Root	6.510