Gene detail information of Glyur000184s00008164 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31890.1 | 0 | RAP |
| NR | XP_003521919.1 | 0 | PREDICTED: uncharacterized protein LOC100805208 isoform X1 [Glycine max] |
| trEMBL | tr|K7KC75|K7KC75_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G01781.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00184 | 10007 | 13610 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000184s00008164.1 | PF08373.5 | RAP | 596 | 653 | 3.60E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.001 |
| SRR1783600 | control | 9.138 |
| SRR1783602 | moderate drought stress | 10.195 |
| SRR1811619 | moderate drought stress | 10.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.920 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.525 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.192 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.893 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.351 |
| SRR2868004 | Drought Stress (root) | 12.264 |
| SRR2967015 | Control (root) | 13.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.891 |
| SRR9715740 | Leaf | 47.064 |
| SRR9715741 | Leaf | 44.055 |
| SRR9715739 | Root | 2.851 |
| SRR9715742 | Root | 13.647 |
| SRR9715743 | Root | 13.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.754 |
| SRR8749028 | MeJA induced 9h | 16.950 |
| SRR8749029 | MeJA induced 9h | 9.859 |
| SRR8749030 | Uninduced | 11.359 |
| SRR8749031 | Uninduced | 10.681 |
| SRR8749032 | Uninduced | 8.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.292 |
| SRR8400027 | Control - Root | 19.131 |