Gene detail information of Glyur000184s00008163 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45760.1 | 1.00E-19 | BON association protein 2 |
| NR | AFK45032.1 | 5.27E-83 | unknown [Lotus japonicus] |
| Swissprot | tr|Q58FX0|BAP2_ARATH | 5.00E-27 | BON1-associated protein 2 |
| trEMBL | tr|I3SXP0|I3SXP0_LOTJA | 2.00E-83 | Uncharacterized protein {ECO:0000313|EMBL:AFK45032.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00184 | 6619 | 7185 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000184s00008163.1 | PF00168.25 | C2 | 6 | 89 | 8.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.283 |
| SRR1783600 | control | 0.285 |
| SRR1783602 | moderate drought stress | 0.257 |
| SRR1811619 | moderate drought stress | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 50.860 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 48.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 83.425 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 82.671 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.367 |
| SRR2868004 | Drought Stress (root) | 10.103 |
| SRR2967015 | Control (root) | 68.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 129.904 |
| SRR9715740 | Leaf | 84.930 |
| SRR9715741 | Leaf | 104.806 |
| SRR9715739 | Root | 98.358 |
| SRR9715742 | Root | 99.779 |
| SRR9715743 | Root | 99.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 111.346 |
| SRR8749028 | MeJA induced 9h | 105.517 |
| SRR8749029 | MeJA induced 9h | 152.055 |
| SRR8749030 | Uninduced | 357.500 |
| SRR8749031 | Uninduced | 154.302 |
| SRR8749032 | Uninduced | 379.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.353 |
| SRR8400027 | Control - Root | 37.060 |