Gene detail information of Glyur000183s00013070 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G20150.1 | 2.00E-18 | |
| NR | KHN28912.1 | 5.29E-27 | hypothetical protein glysoja_025706 [Glycine soja] |
| trEMBL | tr|A0A072UQY6|A0A072UQY6_MEDTR | 2.00E-27 | Complex I subunit {ECO:0000313|EMBL:KEH31438.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00183 | 263233 | 266308 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.113 |
| SRR1783600 | control | 0.058 |
| SRR1783602 | moderate drought stress | 0.402 |
| SRR1811619 | moderate drought stress | 0.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.154 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.041 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.041 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.077 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.354 |
| SRR2868004 | Drought Stress (root) | 0.192 |
| SRR2967015 | Control (root) | 0.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.251 |
| SRR9715740 | Leaf | 0.502 |
| SRR9715741 | Leaf | 0.767 |
| SRR9715739 | Root | 0.046 |
| SRR9715742 | Root | 0.016 |
| SRR9715743 | Root | 0.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.940 |
| SRR8749028 | MeJA induced 9h | 3.926 |
| SRR8749029 | MeJA induced 9h | 8.967 |
| SRR8749030 | Uninduced | 0.428 |
| SRR8749031 | Uninduced | 20.786 |
| SRR8749032 | Uninduced | 18.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.396 |
| SRR8400027 | Control - Root | 0.453 |