Gene detail information of Glyur000183s00013049.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30760.16.00E-177FAD-binding Berberine family protein
NRXP_004504721.10PREDICTED: reticuline oxidase-like protein-like [Cicer arietinum]
COGYP_001698653.17.00E-37reticuline oxidase [Lysinibacillus sphaericus C3-41]
Swissprottr|Q8GTB6|THCAS_CANSA6.00E-159Tetrahydrocannabinolic acid synthase (Precursor)
trEMBLtr|K7L5I0|K7L5I0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G08570.2}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00183170526172127-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyAA7


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0008762  UDP-N-acetylmuramate dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0050660  flavin adenine dinucleotide binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000183s00013049.1PF01565.18FAD_binding_4762153.10E-26
Glyur000183s00013049.1PF08031.7BBE4685251.60E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control87.202
SRR1783600control89.381
SRR1783602moderate drought stress95.533
SRR1811619moderate drought stress95.297

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain74.705
DRR006520Root Summer glycyrrhizin high producing strain73.548
DRR006521Root Winter glycyrrhizin high producing strain8.886
DRR006522Root Winter glycyrrhizin high producing strain8.763
DRR006523Root Summer glycyrrhizin low producing strain124.254
DRR006524Root Summer glycyrrhizin low producing strain122.276
DRR006525Leaf Summer glycyrrhizin high producing strain8.692
DRR006526Leaf Summer glycyrrhizin high producing strain8.817

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)59.472
SRR2868004Drought Stress (root)172.294
SRR2967015Control (root)69.220

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf31.672
SRR9715740Leaf61.450
SRR9715741Leaf57.503
SRR9715739Root35.242
SRR9715742Root96.098
SRR9715743Root80.586

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h319.506
SRR8749028MeJA induced 9h269.079
SRR8749029MeJA induced 9h157.267
SRR8749030Uninduced47.750
SRR8749031Uninduced12.250
SRR8749032Uninduced10.376

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root99.191
SRR8400027Control - Root74.578

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved