Gene detail

Gene detail information of Glyur000183s00013035

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G61820.1	4.00E-128
NR	XP_004504713.1	0	PREDICTED: uncharacterized protein LOC101499286 [Cicer arietinum]
trEMBL	tr\|A0A072UNX5\|A0A072UNX5_MEDTR	0	Stress up-regulated Nod 19 protein {ECO:0000313\|EMBL:KEH31347.1}

Sequence

Transcript Sequence

>Glyur000183s00013035.1
CCAAGCACGAACAAAACATGCAATGAATCATGAATGAATCCAAAGAGCACCAAATTCAGAACTTTTCCTTTTCCTGAGTGTGAAAAGCCTAAACGCCGTTCTCCCTTGAGATGACTCTCTCTCTCTCCCTTTTCTCCTATAAATAAGCGAATCTAGTTTCATGGTCACACTGACTCGATATTTCCATCTCGTCAAACAAAGCCCAACTCTGTCTCTTTTTGAGAACAACATCAACATGTTTTTTGTATCTGGAGATTTGGTATTTTCACTGGCAATACTTCTGTTGGTGTTGGGAACACCATGCTCAGGTTCTTTTGGGAAGACTGAAGATAAGATAAAATCAGCTGTTTTTCTGTCCCCCAAGTTTGAACTTGGACCTGGATCGGTTATCAATAGATATTACTATGATATTGATTTCCCAAGAGGTCATGTTGCACTCAAGAGTTTCAATGCTGAAGTAATTGATGAAGATGGGAACCCTGTATCCCTCCATGAAACTTATCTCCACCATTGGCTTGTTGTAAGATACTATCAACCTAAACTTGGGACGCACACAGACGTAGTGTATGATGGCCATAGGGTGCTTCACCAGTCTGATAATGATTCTGTTGTGGTGAGGAACAGTGGCATATGCCAGAGAGATGTTCTTTCACAGTATTTTGGCCTTGGATCTGAAACACGAGGAACAGCTACCGATATTCCGGATCCTTTTGGTATAGAAATTGGTAATCCTGCAGATATTCCAGAGGGGTATGAGGAGAAGTGGCTGCTCAATGTCCATGCCATCGATACACGGGGCGCAGAGGATAAGCTGGGGTGCACTGAGTGCAAGTGTGACCTTTATAATGTTACAAAGGATGAATATGGTAGGCCTTTAAGGCAAAATTATAAAGGAGGTTTGTTATGTTGCTATGATTATACCCAGTGCAGGTTGAGGGAAGGCTTTGAGGGCCCAAGGAGAAGCCTCTACCTAAGATACACAGTAAAATGGGTTGACTGGGATGATTTTATAGTGCCTGTTAAGATTTATATACTTGATGTGACTGATACGTTGCAACTATCAAATAATTCGAAAGGAATGAGCTTAGATCATGATTGCAAGGTTGAGTATGTAATTGAATCTTGCAGCACAGACCATAAGGATGGCAATGGCTGTCTTGATGTGAAGAGGACAAGTCTCCCAATGCAAACTGGTGGCTATGTTGTCTATGGCGTTGCTCATCAACATTTAGGTGGAATTGGATCAACTCTATATGGCCAGGATGGGAGGGTTATATGTTCTTCTATACCGAGTTATGGAAATGGAAATGAAGCAGGAAATGAGGCAGGCTACATTGTTGGAATGTCCACTTGTTATCCTCGACCAGGTTCTGTCAAGATAATTGATGGCGAAACTTTAACTCTGGAGTCTCACTATAACAGCAGCCAGGAGCACACTGGGGTAATGGGGCTTTTCTACCTATTGGTGGCAGAAAAACTGCCACACCAACACTTCAGACACTCCACTCGTTCTTCATTTTTTATGGATGTAAATAATGTATTTNATTGATTAGGTAATTAGTTACATGTTAATATAAGTGGAGAGTACTGTCATCGGTAGTAACTAAGTATACGATATGATAAAGAAAAGGAATAAAGACAGTAACACTTCTCATGTCTGCAGTGGGTATATTCTCGAGTGTATCAATCATTTTGATTCCGTGTTTTAGTGACATAATACATATATGGTTTGTATTGTTAGCTTAAACCCCTCTTGCTTATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00183	108872	112151	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000183s00013035.1	PF07712.7	SURNod19	53	443	3.80E-213

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.200
SRR1783600	control	4.187
SRR1783602	moderate drought stress	4.321
SRR1811619	moderate drought stress	4.521

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.908
DRR006520	Root Summer glycyrrhizin high producing strain	8.732
DRR006521	Root Winter glycyrrhizin high producing strain	13.843
DRR006522	Root Winter glycyrrhizin high producing strain	13.528
DRR006523	Root Summer glycyrrhizin low producing strain	50.017
DRR006524	Root Summer glycyrrhizin low producing strain	49.813
DRR006525	Leaf Summer glycyrrhizin high producing strain	58.745
DRR006526	Leaf Summer glycyrrhizin high producing strain	58.814

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	47.539
SRR2868004	Drought Stress (root)	89.016
SRR2967015	Control (root)	61.119

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	353.821
SRR9715740	Leaf	184.431
SRR9715741	Leaf	558.762
SRR9715739	Root	11.538
SRR9715742	Root	9.208
SRR9715743	Root	9.760

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	231.325
SRR8749028	MeJA induced 9h	456.718
SRR8749029	MeJA induced 9h	357.188
SRR8749030	Uninduced	177.621
SRR8749031	Uninduced	137.642
SRR8749032	Uninduced	131.401

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	55.283
SRR8400027	Control - Root	27.836