Gene detail information of Glyur000183s00013032 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64520.1 | 8.00E-26 | regulatory particle non-ATPase 12A |
| NR | XP_003531078.1 | 2.24E-34 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A-like [Glycine max] |
| Swissprot | tr|Q9SGW3|PSD8A_ARATH | 4.00E-31 | 26S proteasome non-ATPase regulatory subunit 8 homolog A |
| trEMBL | tr|I1KRD4|I1KRD4_SOYBN | 8.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G08690.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00183 | 98032 | 98902 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.382 |
| SRR1783600 | control | 44.724 |
| SRR1783602 | moderate drought stress | 41.152 |
| SRR1811619 | moderate drought stress | 40.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.303 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.484 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.575 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.381 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.530 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.384 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.861 |
| SRR2868004 | Drought Stress (root) | 48.535 |
| SRR2967015 | Control (root) | 52.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.124 |
| SRR9715740 | Leaf | 12.089 |
| SRR9715741 | Leaf | 13.747 |
| SRR9715739 | Root | 22.628 |
| SRR9715742 | Root | 24.733 |
| SRR9715743 | Root | 23.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 120.228 |
| SRR8749028 | MeJA induced 9h | 94.710 |
| SRR8749029 | MeJA induced 9h | 91.196 |
| SRR8749030 | Uninduced | 33.189 |
| SRR8749031 | Uninduced | 36.431 |
| SRR8749032 | Uninduced | 37.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 84.811 |
| SRR8400027 | Control - Root | 81.528 |