Gene detail information of Glyur000183s00013031 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64520.1 | 3.00E-11 | regulatory particle non-ATPase 12A |
| NR | ABI31652.1 | 7.97E-13 | 26S proteasome regulatory particle non-ATPase subunit 12 [Camellia sinensis] |
| Swissprot | tr|Q9SGW3|PSD8A_ARATH | 5.00E-13 | 26S proteasome non-ATPase regulatory subunit 8 homolog A |
| trEMBL | tr|Q0GEA1|Q0GEA1_CAMSI | 3.00E-13 | 26S proteasome regulatory particle non-ATPase subunit 12 {ECO:0000313|EMBL:ABI31652.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00183 | 96253 | 97788 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.703 |
| SRR1783600 | control | 12.658 |
| SRR1783602 | moderate drought stress | 17.572 |
| SRR1811619 | moderate drought stress | 13.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.508 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 56.773 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 76.165 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 70.127 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.451 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.066 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.437 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.903 |
| SRR2868004 | Drought Stress (root) | 19.374 |
| SRR2967015 | Control (root) | 22.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.083 |
| SRR9715740 | Leaf | 6.791 |
| SRR9715741 | Leaf | 5.671 |
| SRR9715739 | Root | 9.385 |
| SRR9715742 | Root | 11.254 |
| SRR9715743 | Root | 10.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.312 |
| SRR8749028 | MeJA induced 9h | 34.910 |
| SRR8749029 | MeJA induced 9h | 26.814 |
| SRR8749030 | Uninduced | 9.097 |
| SRR8749031 | Uninduced | 8.931 |
| SRR8749032 | Uninduced | 11.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.498 |
| SRR8400027 | Control - Root | 35.104 |