Gene detail information of Glyur000183s00013025 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G46340.1 | 5.00E-160 | O-acetyltransferase family protein |
| NR | XP_004504706.1 | 0 | PREDICTED: CAS1 domain-containing protein 1-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072UPV3|A0A072UPV3_MEDTR | 0 | O-acetyltransferase family protein {ECO:0000313|EMBL:KEH31361.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00183 | 49993 | 57778 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000183s00013025.1 | PF07779.7 | Cas1_AcylT | 98 | 356 | 7.40E-56 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.548 |
| SRR1783600 | control | 36.411 |
| SRR1783602 | moderate drought stress | 15.769 |
| SRR1811619 | moderate drought stress | 15.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.842 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.285 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.213 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.323 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.073 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.918 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 59.022 |
| SRR2868004 | Drought Stress (root) | 49.184 |
| SRR2967015 | Control (root) | 41.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.463 |
| SRR9715740 | Leaf | 19.040 |
| SRR9715741 | Leaf | 16.476 |
| SRR9715739 | Root | 9.453 |
| SRR9715742 | Root | 28.986 |
| SRR9715743 | Root | 23.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.004 |
| SRR8749028 | MeJA induced 9h | 25.780 |
| SRR8749029 | MeJA induced 9h | 20.366 |
| SRR8749030 | Uninduced | 19.682 |
| SRR8749031 | Uninduced | 7.471 |
| SRR8749032 | Uninduced | 4.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.963 |
| SRR8400027 | Control - Root | 50.174 |