Gene detail information of Glyur000183s00013020 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006580036.1 | 1.33E-82 | PREDICTED: uncharacterized protein LOC102659480 [Glycine max] |
| trEMBL | tr|K7KPW7|K7KPW7_SOYBN | 5.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G25821.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00183 | 23537 | 27144 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.310 |
| SRR1783600 | control | 0.331 |
| SRR1783602 | moderate drought stress | 0.314 |
| SRR1811619 | moderate drought stress | 0.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.230 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.121 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.131 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.973 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.981 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2399.593 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2160.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 65.147 |
| SRR2868004 | Drought Stress (root) | 100.304 |
| SRR2967015 | Control (root) | 22.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1665.143 |
| SRR9715740 | Leaf | 1332.515 |
| SRR9715741 | Leaf | 854.694 |
| SRR9715739 | Root | 0.601 |
| SRR9715742 | Root | 3.979 |
| SRR9715743 | Root | 3.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.573 |
| SRR8749028 | MeJA induced 9h | 20.051 |
| SRR8749029 | MeJA induced 9h | 13.983 |
| SRR8749030 | Uninduced | 6.289 |
| SRR8749031 | Uninduced | 1.277 |
| SRR8749032 | Uninduced | 19.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.709 |
| SRR8400027 | Control - Root | 2.293 |