Gene detail information of Glyur000183s00013019.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G46330.10Leucine-rich receptor-like protein kinase family protein
NRXP_003532650.10PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max]
COGYP_004775215.18.00E-63RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9FL28|FLS2_ARATH0LRR receptor-like serine/threonine-protein kinase FLS2 (Precursor)
trEMBLtr|I1KRE5|I1KRE5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G08810.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold001831995527051+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K13420FLS2EC:2.7.11.1MAPK signaling pathway - plantmap04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000183s00013019.1PF08263.7LRRNT_234718.00E-11
Glyur000183s00013019.1PF00560.28LRR_11011190.92
Glyur000183s00013019.1PF00560.28LRR_11481710.051
Glyur000183s00013019.1PF13855.1LRR_83894475.60E-07
Glyur000183s00013019.1PF00560.28LRR_15095310.8
Glyur000183s00013019.1PF13855.1LRR_85826426.10E-08
Glyur000183s00013019.1PF13855.1LRR_86597155.10E-11
Glyur000183s00013019.1PF00560.28LRR_17287490.29
Glyur000183s00013019.1PF13516.1LRR_67517640.43
Glyur000183s00013019.1PF00069.20Pkinase87811562.90E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.133
SRR1783600control0.156
SRR1783602moderate drought stress0.152
SRR1811619moderate drought stress0.135

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.728
DRR006520Root Summer glycyrrhizin high producing strain0.597
DRR006521Root Winter glycyrrhizin high producing strain11.888
DRR006522Root Winter glycyrrhizin high producing strain11.605
DRR006523Root Summer glycyrrhizin low producing strain1.512
DRR006524Root Summer glycyrrhizin low producing strain1.545
DRR006525Leaf Summer glycyrrhizin high producing strain1278.131
DRR006526Leaf Summer glycyrrhizin high producing strain1030.096

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)31.864
SRR2868004Drought Stress (root)38.307
SRR2967015Control (root)15.022

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf411.043
SRR9715740Leaf394.647
SRR9715741Leaf352.818
SRR9715739Root0.365
SRR9715742Root2.430
SRR9715743Root2.146

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.732
SRR8749028MeJA induced 9h10.695
SRR8749029MeJA induced 9h8.112
SRR8749030Uninduced3.856
SRR8749031Uninduced0.945
SRR8749032Uninduced10.751

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root1.960
SRR8400027Control - Root1.844

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved