Gene detail information of Glyur000182s00014547 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52920.1 | 1.00E-149 | G protein coupled receptor |
| NR | KEH38770.1 | 0 | G protein coupled receptor [Medicago truncatula] |
| COG | YP_008146664.1 | 6.00E-16 | hypothetical protein SCE1572_00940 [Sorangium cellulosum So0157-2] |
| Swissprot | tr|F4IEM5|GCR2_ARATH | 0 | LanC-like protein GCR2 |
| trEMBL | tr|A0A072VKU4|A0A072VKU4_MEDTR | 0 | G protein coupled receptor {ECO:0000313|EMBL:KEH38770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00182 | 254440 | 257475 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000182s00014547.1 | PF05147.8 | LANC_like | 76 | 120 | 1.20E-05 |
| Glyur000182s00014547.1 | PF05147.8 | LANC_like | 128 | 379 | 7.00E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.661 |
| SRR1783600 | control | 21.520 |
| SRR1783602 | moderate drought stress | 32.867 |
| SRR1811619 | moderate drought stress | 32.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.417 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 55.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 56.126 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 54.620 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 58.792 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 58.954 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.528 |
| SRR2868004 | Drought Stress (root) | 23.005 |
| SRR2967015 | Control (root) | 37.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.083 |
| SRR9715740 | Leaf | 26.586 |
| SRR9715741 | Leaf | 13.007 |
| SRR9715739 | Root | 38.252 |
| SRR9715742 | Root | 26.004 |
| SRR9715743 | Root | 25.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.966 |
| SRR8749028 | MeJA induced 9h | 19.286 |
| SRR8749029 | MeJA induced 9h | 11.751 |
| SRR8749030 | Uninduced | 11.506 |
| SRR8749031 | Uninduced | 18.139 |
| SRR8749032 | Uninduced | 23.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.757 |
| SRR8400027 | Control - Root | 37.750 |