Gene detail information of Glyur000182s00014542 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27435.1 | 1.00E-66 | Protein of unknown function (DUF1218) |
| NR | XP_004487683.1 | 6.97E-111 | PREDICTED: uncharacterized protein LOC101507854 [Cicer arietinum] |
| trEMBL | tr|C6SW14|C6SW14_SOYBN | 1.00E-110 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G35510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00182 | 214164 | 216398 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000182s00014542.1 | PF06749.7 | DUF1218 | 57 | 154 | 3.10E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.211 |
| SRR1783600 | control | 41.637 |
| SRR1783602 | moderate drought stress | 37.618 |
| SRR1811619 | moderate drought stress | 37.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.377 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.679 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.077 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.667 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.021 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 55.530 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.397 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 241.864 |
| SRR2868004 | Drought Stress (root) | 167.574 |
| SRR2967015 | Control (root) | 154.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 69.202 |
| SRR9715740 | Leaf | 46.607 |
| SRR9715741 | Leaf | 36.298 |
| SRR9715739 | Root | 131.046 |
| SRR9715742 | Root | 128.823 |
| SRR9715743 | Root | 127.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.594 |
| SRR8749028 | MeJA induced 9h | 42.845 |
| SRR8749029 | MeJA induced 9h | 36.510 |
| SRR8749030 | Uninduced | 5.316 |
| SRR8749031 | Uninduced | 1.488 |
| SRR8749032 | Uninduced | 4.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 200.697 |
| SRR8400027 | Control - Root | 257.447 |