Gene detail information of Glyur000182s00014540 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27430.2 | 2.00E-112 | COP1-interacting protein 7 |
| NR | KHN36797.1 | 0 | hypothetical protein glysoja_001528 [Glycine soja] |
| trEMBL | tr|I1M3B6|I1M3B6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G35520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00182 | 198228 | 205237 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.106 |
| SRR1783600 | control | 14.582 |
| SRR1783602 | moderate drought stress | 30.371 |
| SRR1811619 | moderate drought stress | 32.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.420 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.383 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.075 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.397 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.392 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.305 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 44.112 |
| SRR2868004 | Drought Stress (root) | 42.042 |
| SRR2967015 | Control (root) | 39.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.007 |
| SRR9715740 | Leaf | 10.639 |
| SRR9715741 | Leaf | 8.707 |
| SRR9715739 | Root | 0.687 |
| SRR9715742 | Root | 8.705 |
| SRR9715743 | Root | 6.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.735 |
| SRR8749028 | MeJA induced 9h | 1.803 |
| SRR8749029 | MeJA induced 9h | 0.832 |
| SRR8749030 | Uninduced | 0.122 |
| SRR8749031 | Uninduced | 0.135 |
| SRR8749032 | Uninduced | 0.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.942 |
| SRR8400027 | Control - Root | 31.029 |