Gene detail

Gene detail information of Glyur000182s00014523

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G16430.2	0	purple acid phosphatase 10
NR	XP_006594791.1	0	PREDICTED: purple acid phosphatase 2-like [Glycine max]
COG	NP_217093.1	5.00E-15	Conserved protein [Mycobacterium tuberculosis H37Rv]
Swissprot	tr\|Q09131\|PPAF_SOYBN	0	Purple acid phosphatase (Precursor)
trEMBL	tr\|I1M3C5\|I1M3C5_SOYBN	0	Purple acid phosphatase {ECO:0000256\|RuleBase:RU361203}

Sequence

Transcript Sequence

>Glyur000182s00014523.1
CCGTTTCACGTGGACACCATTCATCGTCGTCCACGTTCAGCCGTTATCCATGAATCACCAGAACATAAACTCAAGTGTCTCGCGTCCCACATAATTAACCTACACCCCCTCACTCCGGACCAACCACATTGCAAGTCAAAACCCAAAGAACAGACGACCACAGCAATTCCTCCGAAGGCGCACCAAACGACACACAACCGCGACACACTGGATCACCAAACGACTATAAACNCTCGCTTTTCGCAGCTCACCGAAGTCGGAGAAGAAAACGCGGCAAGTAAAAACTCGAGAGTCGGAGACTAAGAACTCAGCCACGCGNGGCGATGGCGTCGGTCCACAGCTCCGTCCCTTCGCACGGCCTCTTGCCGTCAATTTCCAGAGGGAAATCCAGACCGAAGGCCACGGCGCAAAACTTTCCGGCGCCGAGATTTCCCCGGAATCGGATTTTCTCGGGAAACAAACGTGCTCCGGTCGCGGCGAATTCGACGGTGGAGGAGGTCGACGTGATATCGGTGCGGAGCGGCGATATAACGGACCAGCAAGAGGGAGTATTGGTGAGCCGTGTGGAGATGGAAGGTGGAGAAGGTGAATTAGGGACACAAGTGAGTGGGTTCGGAGCGAATGAGGGTTTGTTATCGTTGGAAGGGTTTTCTTCTTCTTCTTCTTCGGNTTTGGTTGGGAAGGAGAACGAGGAGAGCACGGAGAAGCTTATAGATAGGACTATCAATGCTTCTATTGTGCTTGCTGCTGGTACTTTCGCTCTCACCAAGCTTCTTACCATTGATAGTGAGTACTGGCATGGATGGACAATTTATGAGATACTAAGATATGCACCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACCAATCCGGTTTTTGCCAAAATGGTGATCAGTGGGGTTGTTTACTCTGTAGGAGATTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAGTTTGACCGTGCACGGATGTTCAGATCAGGGCTTGTTGGTTTTACTCTACATGGCTCTCTTTCTCATTATTATTATCAGTTTTGTGAGGAGCTATTTCCTTACAAAGGATGGTGGGTAGTTCCTGCCAAAGTTGCCTTCGATCAAACTGCATGGTCTGCAGTTTGGAACAGCATTTATTATACGGTTGTGGGGTTCCTGCGTCTTGATTCTCCAATCAATATTTTTAATGAATTGAAGGCAACATTTTTTCCCATGTTGACTGCAGGGTGGAAGCTGTGGCCATTTGCTCATCTCATTACTTATGGTGTAATACCAGTTGAGCAAAGACTTCTTTGGGTGGATATGGTAGAGCTTATTTGGGTGACCATACTTTCAACGAGTAATGAGAAGCGATACATGGCCAGAAGCAATGGGAGAAAAATGACTATGCTCAATCAGATTGTTGAAAATATGGGAAAAGCTGATCCAACAGCTATGGCCTTGGTTTTCTGTTACTTGGTTTTGCTTCTTCTGAATGTGGCTGTGGTTTGCAATGGAGGCAAGACAAGCACTTTCATCAGAAAACCCGAAAAGACTATGGACATGCCACTTGATAGTGATGTATTTGTAGCACCTTCTGGCTATAATGCTCCCCAGCAGGTTCATATAACACAAGGTGACCATGTGGGTAAGGCCATGATCGTGTCATGGGTGACTGTGAATGAACCAGGAAAGAGTGTAGTGCATTATTGGAGTGATAATTGTCCAAACAAGAAGGTGGCCAAGGGAAATTATGTGACCTATACATTCTTCAATTACACATCTGGTTTTATTCATCATTGTACCCTTAGAAATTTGGAGTTTGACACAAAATACTATTATGAGGTTGGAATTGGGCACACTAGGAGGCAATTTTGGTTTATGACCCCTCCTGAAGTTCATCCTGATGTGCCTTATACATTTGGTCTCATTGGGGATCTGGGTCAGACTTTTGATTCAAACAAGACCCTTGATCACTATGAATCGAACCCTAAGAAAGGACAAGCTGTGTTGTTTGTTGGAGACCTCTCTTATGCAGATAATTACCCAAATCATGATAATGTTAGGTGGGATACATGGGGAAGGTTCACAGAAAGAAGTGTTGCTTATCAACCTTGGATATGGACTACAGGAAACCATGAACTTGACTTTGCCCCTGAAATTGATGAAACAGAACCTTACAAGCCTTTCACCCACCGTTATCATGTCCCTTACAAAGCATCAGGAAGTACTGCACCATTTTGGTACTCTATCAAGAGAGCTTCTGCACACATCATAGTCTTGGCTTCATATTCAGCTTATGGTAAATATACTCCCCAATATGAATGGCTTCAGGCAGAGTTACCAAAGGTTGATAGGAACAAGACTCCATGGTTGATTGTTCTTGTGCATTCTCCTTGGTATAACAGCTACAACTATCATTATCTGGAAGGGGAAACCATGAGGGTGATGTTTGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTCTTTGCTGGTCACGTCCATGCCTATGAACGAACTGAACGTGTCTCCAATGTTGCATACAACATTGTAAATGGTCGTTGTGGACCAATAAAGGATCAATCAGCTCCTGTGTACATCACCATAGGTGATGGAGGGAACATTGAAGGCTTAGCAAACAACATGACAGAGCCACAGCCTGAGTACTCTGCATACCGTGAGGCCAGTTTTGGGCATGCAATTTTCGAAATAAAGAACAGAACACATGCTCACTATAGCTGGCACCGAAATCAAGATGCATATGCTGTGCAGGCTGATTCCATGTGGTTTTTTAACAGACACTGGCATCCTCTTGATGATTCCACAACCAAATGAACCAATCTACATCAGTTGGATAGTTTTGTTGAGTTCTTTTGTTCCTTTTTTGAAATATATCCCCATAGTAATGTAGTGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00182	104508	113352	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0003993 acid phosphatase activity

GO:0016787 hydrolase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000182s00014523.1	PF04117.7	Mpv17_PMP22	286	344	5.10E-16
Glyur000182s00014523.1	PF00149.23	Metallophos	528	726	9.70E-25
Glyur000182s00014523.1	PF14008.1	Metallophos_C	751	810	4.00E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.630
SRR1783600	control	1.585
SRR1783602	moderate drought stress	3.037
SRR1811619	moderate drought stress	3.011

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.099
DRR006520	Root Summer glycyrrhizin high producing strain	8.973
DRR006521	Root Winter glycyrrhizin high producing strain	11.023
DRR006522	Root Winter glycyrrhizin high producing strain	10.509
DRR006523	Root Summer glycyrrhizin low producing strain	9.657
DRR006524	Root Summer glycyrrhizin low producing strain	9.819
DRR006525	Leaf Summer glycyrrhizin high producing strain	74.189
DRR006526	Leaf Summer glycyrrhizin high producing strain	73.667

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.186
SRR2868004	Drought Stress (root)	33.267
SRR2967015	Control (root)	50.740

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	167.998
SRR9715740	Leaf	240.035
SRR9715741	Leaf	182.724
SRR9715739	Root	6.035
SRR9715742	Root	12.176
SRR9715743	Root	12.148

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.546
SRR8749028	MeJA induced 9h	30.130
SRR8749029	MeJA induced 9h	15.191
SRR8749030	Uninduced	11.085
SRR8749031	Uninduced	12.706
SRR8749032	Uninduced	19.729

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.539
SRR8400027	Control - Root	15.616