Gene detail information of Glyur000182s00014515 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27390.1 | 1.00E-53 | |
| NR | XP_003540443.1 | 9.55E-132 | PREDICTED: uncharacterized protein LOC100780992 [Glycine max] |
| COG | YP_001518427.1 | 5.00E-10 | hypothetical protein AM1_4129 [Acaryochloris marina MBIC11017] |
| trEMBL | tr|I1LUW7|I1LUW7_SOYBN | 4.00E-132 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G34860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00182 | 44176 | 48308 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.080 |
| SRR1783600 | control | 3.375 |
| SRR1783602 | moderate drought stress | 5.522 |
| SRR1811619 | moderate drought stress | 5.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.660 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.913 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.848 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.429 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.037 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.796 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.433 |
| SRR2868004 | Drought Stress (root) | 7.491 |
| SRR2967015 | Control (root) | 8.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.042 |
| SRR9715740 | Leaf | 53.572 |
| SRR9715741 | Leaf | 33.699 |
| SRR9715739 | Root | 5.047 |
| SRR9715742 | Root | 7.455 |
| SRR9715743 | Root | 8.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.614 |
| SRR8749028 | MeJA induced 9h | 3.813 |
| SRR8749029 | MeJA induced 9h | 1.854 |
| SRR8749030 | Uninduced | 3.204 |
| SRR8749031 | Uninduced | 0.169 |
| SRR8749032 | Uninduced | 0.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.467 |
| SRR8400027 | Control - Root | 9.378 |