Gene detail information of Glyur000182s00014511 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61260.1 | 3.00E-54 | Protein of unknown function (DUF761) |
| NR | XP_003541858.1 | 5.44E-155 | PREDICTED: uncharacterized protein LOC100818795 isoform X1 [Glycine max] |
| trEMBL | tr|I1M3D6|I1M3D6_SOYBN | 2.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G35750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00182 | 23784 | 25753 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000182s00014511.1 | PF14364.1 | DUF4408 | 38 | 70 | 3.30E-11 |
| Glyur000182s00014511.1 | PF05553.6 | DUF761 | 303 | 340 | 3.80E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.884 |
| SRR1783600 | control | 3.875 |
| SRR1783602 | moderate drought stress | 3.660 |
| SRR1811619 | moderate drought stress | 3.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.765 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.646 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 162.476 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 159.036 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.367 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.485 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.677 |
| SRR2868004 | Drought Stress (root) | 10.463 |
| SRR2967015 | Control (root) | 10.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.515 |
| SRR9715740 | Leaf | 7.109 |
| SRR9715741 | Leaf | 5.451 |
| SRR9715739 | Root | 7.389 |
| SRR9715742 | Root | 5.331 |
| SRR9715743 | Root | 5.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.525 |
| SRR8749028 | MeJA induced 9h | 4.127 |
| SRR8749029 | MeJA induced 9h | 3.290 |
| SRR8749030 | Uninduced | 1.092 |
| SRR8749031 | Uninduced | 0.749 |
| SRR8749032 | Uninduced | 0.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.894 |
| SRR8400027 | Control - Root | 10.951 |