Gene detail information of Glyur000182s00014508 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20870.1 | 9.00E-41 | HSP20-like chaperones superfamily protein |
| NR | XP_006597328.1 | 0 | PREDICTED: uncharacterized protein LOC100786407 isoform X3 [Glycine max] |
| trEMBL | tr|I1MDP9|I1MDP9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00182 | 6047 | 11959 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.046 |
| SRR1783600 | control | 16.952 |
| SRR1783602 | moderate drought stress | 36.033 |
| SRR1811619 | moderate drought stress | 35.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.597 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.956 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.338 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.602 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.623 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.594 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.102 |
| SRR2868004 | Drought Stress (root) | 30.423 |
| SRR2967015 | Control (root) | 25.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.554 |
| SRR9715740 | Leaf | 12.030 |
| SRR9715741 | Leaf | 13.292 |
| SRR9715739 | Root | 3.535 |
| SRR9715742 | Root | 11.194 |
| SRR9715743 | Root | 10.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.595 |
| SRR8749028 | MeJA induced 9h | 30.108 |
| SRR8749029 | MeJA induced 9h | 15.665 |
| SRR8749030 | Uninduced | 43.225 |
| SRR8749031 | Uninduced | 13.239 |
| SRR8749032 | Uninduced | 16.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.631 |
| SRR8400027 | Control - Root | 32.413 |