Gene detail information of Glyur000181s00013109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16000.1 | 7.00E-99 | MAR binding filament-like protein 1 |
| NR | XP_003606225.1 | 0 | MAR-binding filament-like protein 1-1 [Medicago truncatula] |
| Swissprot | tr|Q9M7J4|MFP1_TOBAC | 0 | MAR-binding filament-like protein 1-1 |
| trEMBL | tr|G7JKW2|G7JKW2_MEDTR | 0 | MAR-binding filament-like protein, putative {ECO:0000313|EMBL:AES88422.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00181 | 250452 | 253639 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.270 |
| SRR1783600 | control | 12.177 |
| SRR1783602 | moderate drought stress | 11.118 |
| SRR1811619 | moderate drought stress | 11.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.308 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.941 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.798 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.083 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 45.050 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.480 |
| SRR2868004 | Drought Stress (root) | 8.008 |
| SRR2967015 | Control (root) | 7.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 45.940 |
| SRR9715740 | Leaf | 71.887 |
| SRR9715741 | Leaf | 38.981 |
| SRR9715739 | Root | 0.853 |
| SRR9715742 | Root | 3.108 |
| SRR9715743 | Root | 2.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.062 |
| SRR8749028 | MeJA induced 9h | 9.031 |
| SRR8749029 | MeJA induced 9h | 10.477 |
| SRR8749030 | Uninduced | 7.228 |
| SRR8749031 | Uninduced | 3.642 |
| SRR8749032 | Uninduced | 5.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.493 |
| SRR8400027 | Control - Root | 10.476 |