Gene detail information of Glyur000181s00013104 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21105.1 | 7.00E-28 | cytochrome-c oxidases;electron carriers |
| NR | XP_007132401.1 | 1.80E-37 | hypothetical protein PHAVU_011G091700g [Phaseolus vulgaris] |
| trEMBL | tr|V7AGI6|V7AGI6_PHAVU | 7.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:ESW04395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00181 | 207680 | 208246 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000181s00013104.1 | PF02238.10 | COX7a | 15 | 68 | 1.90E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.940 |
| SRR1783600 | control | 44.016 |
| SRR1783602 | moderate drought stress | 26.327 |
| SRR1811619 | moderate drought stress | 25.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.323 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 67.044 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 49.840 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 51.800 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.832 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.889 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 63.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 68.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 278.328 |
| SRR2868004 | Drought Stress (root) | 249.780 |
| SRR2967015 | Control (root) | 199.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 204.370 |
| SRR9715740 | Leaf | 132.283 |
| SRR9715741 | Leaf | 181.050 |
| SRR9715739 | Root | 52.727 |
| SRR9715742 | Root | 55.428 |
| SRR9715743 | Root | 59.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 183.434 |
| SRR8749028 | MeJA induced 9h | 82.607 |
| SRR8749029 | MeJA induced 9h | 161.703 |
| SRR8749030 | Uninduced | 146.887 |
| SRR8749031 | Uninduced | 129.344 |
| SRR8749032 | Uninduced | 165.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 180.412 |
| SRR8400027 | Control - Root | 183.548 |