Gene detail information of Glyur000181s00013101 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22580.1 | 7.00E-30 | Stress responsive A/B Barrel Domain |
| NR | XP_003539812.1 | 1.22E-61 | PREDICTED: uncharacterized protein At5g22580-like [Glycine max] |
| COG | YP_003372990.1 | 3.00E-11 | stress responsive alpha-beta barrel domain-containing protein [Pirellula staleyi DSM 6068] |
| Swissprot | tr|Q9FK81|Y5258_ARATH | 2.00E-37 | Uncharacterized protein At5g22580 |
| trEMBL | tr|I1LRD2|I1LRD2_SOYBN | 5.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G09120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00181 | 188537 | 189346 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000181s00013101.1 | PF07876.7 | Dabb | 5 | 96 | 1.40E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.959 |
| SRR1783600 | control | 8.686 |
| SRR1783602 | moderate drought stress | 14.431 |
| SRR1811619 | moderate drought stress | 14.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.648 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.223 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.637 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.579 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.538 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.933 |
| SRR2868004 | Drought Stress (root) | 81.926 |
| SRR2967015 | Control (root) | 34.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.991 |
| SRR9715740 | Leaf | 0.936 |
| SRR9715741 | Leaf | 3.084 |
| SRR9715739 | Root | 19.338 |
| SRR9715742 | Root | 24.397 |
| SRR9715743 | Root | 19.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.097 |
| SRR8749028 | MeJA induced 9h | 0.363 |
| SRR8749029 | MeJA induced 9h | 0.250 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.135 |
| SRR8749032 | Uninduced | 0.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.232 |
| SRR8400027 | Control - Root | 51.479 |