Gene detail information of Glyur000181s00013099 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44716.1 | 3.00E-07 | |
| NR | KHN38662.1 | 3.65E-115 | hypothetical protein glysoja_008211 [Glycine soja] |
| trEMBL | tr|I1LKV3|I1LKV3_SOYBN | 1.00E-115 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G19370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00181 | 186681 | 187655 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.425 |
| SRR1783600 | control | 12.834 |
| SRR1783602 | moderate drought stress | 22.591 |
| SRR1811619 | moderate drought stress | 22.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.975 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.690 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.939 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.357 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.347 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.188 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.480 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.534 |
| SRR2868004 | Drought Stress (root) | 13.290 |
| SRR2967015 | Control (root) | 12.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.695 |
| SRR9715740 | Leaf | 2.238 |
| SRR9715741 | Leaf | 3.678 |
| SRR9715739 | Root | 4.241 |
| SRR9715742 | Root | 8.018 |
| SRR9715743 | Root | 7.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.057 |
| SRR8749028 | MeJA induced 9h | 0.289 |
| SRR8749029 | MeJA induced 9h | 1.490 |
| SRR8749030 | Uninduced | 0.029 |
| SRR8749031 | Uninduced | 0.539 |
| SRR8749032 | Uninduced | 1.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.111 |
| SRR8400027 | Control - Root | 20.243 |