Gene detail

Gene detail information of Glyur000181s00013096

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25150.1	2.00E-104	HXXXD-type acyl-transferase family protein
NR	XP_003552927.1	0	PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Glycine max]
Swissprot	tr\|Q8S9G6\|T5AT_TAXWC	3.00E-65	Taxadien-5-alpha-ol O-acetyltransferase
trEMBL	tr\|V7BP60\|V7BP60_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW18840.1}

Sequence

Transcript Sequence

>Glyur000181s00013096.1
ATGAAGCAGACCCATCTCATCTCACTTGATCCTCACCTCTCTATTCTCTATACACATCCTTTTTCCATGGCAAATCAGAAGACACCCCTCTCCCTTGATATCAAGGATGTTGTNATAGTTAAACCATCCAAACCCACACCTTCTGATATTCTTTCTCTGTCCANCATTGACAATGATCCTAANATCAACATTCTCTGTCAAACCNTTTATGTGTACCAAGCAAATCTTGATTCCCCGAATGGCCAACAAGACCCTGCTTATGTGATCAAAGAAGCCCTCTCAAAGGCTTTGGTGTACTATTATCCTCTTNCAGGGAAGATAATAACAGTTGATGATGGGAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAACTGCAAACTGTGAACTCTCTTCCCTTCACTATCTTGAAGGGGTTGATGTTCCAACTGCACAGAAATTGGTGTTTGATAACCCTTCTCAAGAGGAAACTAGTAACCACCCCTTGGTTTTCAAGGTGACCAAGTTTCTCTGTGGTGGTTTCACAATTGGAATGGGCTTGTCACACACTGTTTGTGATGGGTTTGGTGCATCTCAGTTCTTCAGAGCCCTGGCTGAACTTGCAAGTGGAAAAAGTGAGCCCTCTGTGAAACCTGTGTGGGAGAGAGAGAGACTAATGGGGACAATCCTTAAGGAACCACCCCAATTTCCCATAGATAAGACTTCAATGGCAACTTCACCATTTTGGCCAACTAAGGAGATTTCGCATGAATGCTTCAACTTGAACAGTGAGTGCATACAAAGTCTCAAAATGAAACTGATGAAGGAAAGTAACAATGTAAAGGAAAGCTTCACAACGCTTGAAACACTTGGTGCCTACGTTTGGAGGTCAAAGGCTAGAGCTTTGAAATTGAGCACNGATGGGAAAACCCTGTTCGGTGTAGCAGTGGGAGTGAGACANTTGTTGGATCCACCTTTGCCTGATGGGTATTATGGGAATGCTTTTGTGGCTTCATATGTGGTGTTAACAGTGAAAGAACTTAATGAAAGACCACTCTCAGAGGTTGNGAAGCTCATCAAAGAGAGCAAAAAACTTCCCTCTAATATTGAATACATCAGAAACTCAATCAATATGTTGGAGGCAATGAGGAAAGGGAACATTAGGATTGAAGGAACAGGTGCATCACTGGCATTAACAGACTGGAGGCAACTGGGTTTGTTGCAAGAAGTGGATTTTGGATGGAAGGCTTCAATGAATATAGTGCCAGTCCCATGGAACATATTTGGCTACGTGGATTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTCTTTGTATCACTCCCCAAAGCTTCCATGCCCAAGTTCAGGGAGGAGATGGAGTCTCTCAACCTCATGAGAGGGGGGCAATCGAGAACAAACCCAAAGAGTGCACCTTTACCAGGAGGGGATCAACAACGCGCCTAAGTTATCTCGAAGATCAAAGAAGCTCTGACGAACAAGTAAAACGGTTTGCATGGAGTCATGGAACTCCTTCACCATACCCATTTTGGGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00181	182015	184506	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000181s00013096.1	PF02458.10	Transferase	33	468	2.30E-100

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.494
SRR1783600	control	5.490
SRR1783602	moderate drought stress	9.274
SRR1811619	moderate drought stress	8.902

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	23.912
DRR006520	Root Summer glycyrrhizin high producing strain	23.913
DRR006521	Root Winter glycyrrhizin high producing strain	7.423
DRR006522	Root Winter glycyrrhizin high producing strain	6.974
DRR006523	Root Summer glycyrrhizin low producing strain	32.712
DRR006524	Root Summer glycyrrhizin low producing strain	32.766
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.616
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.637

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.539
SRR2868004	Drought Stress (root)	12.006
SRR2967015	Control (root)	11.619

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.559
SRR9715740	Leaf	3.324
SRR9715741	Leaf	3.578
SRR9715739	Root	2.002
SRR9715742	Root	29.361
SRR9715743	Root	22.896

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.143
SRR8749028	MeJA induced 9h	2.111
SRR8749029	MeJA induced 9h	3.797
SRR8749030	Uninduced	1.650
SRR8749031	Uninduced	2.358
SRR8749032	Uninduced	4.376

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.682
SRR8400027	Control - Root	7.243