Gene detail information of Glyur000180s00014080 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39210.1 | 5.00E-177 | Major facilitator superfamily protein |
| NR | XP_003590250.1 | 0 | Nodule-specific protein Nlj70 [Medicago truncatula] |
| trEMBL | tr|G7I7D1|G7I7D1_MEDTR | 0 | MFS transporter {ECO:0000313|EMBL:AES60501.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00180 | 235270 | 237042 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000180s00014080.1 | PF06813.8 | Nodulin-like | 29 | 274 | 5.60E-93 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.147 |
| SRR1783600 | control | 6.207 |
| SRR1783602 | moderate drought stress | 4.165 |
| SRR1811619 | moderate drought stress | 3.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.120 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.212 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.189 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.095 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.139 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.637 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.793 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.640 |
| SRR2868004 | Drought Stress (root) | 0.797 |
| SRR2967015 | Control (root) | 0.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 70.482 |
| SRR9715740 | Leaf | 68.717 |
| SRR9715741 | Leaf | 74.674 |
| SRR9715739 | Root | 3.220 |
| SRR9715742 | Root | 9.317 |
| SRR9715743 | Root | 6.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.333 |
| SRR8749028 | MeJA induced 9h | 0.532 |
| SRR8749029 | MeJA induced 9h | 0.518 |
| SRR8749030 | Uninduced | 0.279 |
| SRR8749031 | Uninduced | 0.313 |
| SRR8749032 | Uninduced | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.081 |
| SRR8400027 | Control - Root | 5.486 |