Gene detail information of Glyur000180s00014078 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04440.1 | 2.00E-71 | Protein of unknown function (DUF1997) |
| NR | XP_003518995.1 | 3.14E-110 | PREDICTED: uncharacterized protein LOC100789119 isoform X1 [Glycine max] |
| trEMBL | tr|I3SZV9|I3SZV9_MEDTR | 2.00E-104 | Uncharacterized protein {ECO:0000313|EMBL:AFK45801.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00180 | 204264 | 209610 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000180s00014078.1 | PF09366.5 | DUF1997 | 46 | 190 | 1.90E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.435 |
| SRR1783600 | control | 2.371 |
| SRR1783602 | moderate drought stress | 2.798 |
| SRR1811619 | moderate drought stress | 2.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.916 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.644 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.639 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.887 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.978 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.096 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.071 |
| SRR2868004 | Drought Stress (root) | 5.484 |
| SRR2967015 | Control (root) | 5.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.874 |
| SRR9715740 | Leaf | 29.996 |
| SRR9715741 | Leaf | 20.968 |
| SRR9715739 | Root | 1.908 |
| SRR9715742 | Root | 2.249 |
| SRR9715743 | Root | 2.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.376 |
| SRR8749028 | MeJA induced 9h | 3.192 |
| SRR8749029 | MeJA induced 9h | 4.839 |
| SRR8749030 | Uninduced | 1.535 |
| SRR8749031 | Uninduced | 0.563 |
| SRR8749032 | Uninduced | 2.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.694 |
| SRR8400027 | Control - Root | 7.727 |