Gene detail information of Glyur000180s00014071 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24764.1 | 9.00E-148 | microtubule-associated proteins 70-2 |
| NR | KHN08880.1 | 0 | Microtubule-associated protein 70-1 [Glycine soja] |
| Swissprot | tr|Q8L7S4|MP702_ARATH | 0 | Microtubule-associated protein 70-2 |
| trEMBL | tr|I1N8R9|I1N8R9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G31040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00180 | 159885 | 164477 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000180s00014071.1 | PF07058.6 | Myosin_HC-like | 197 | 481 | 2.40E-103 |
| Glyur000180s00014071.1 | PF07058.6 | Myosin_HC-like | 481 | 510 | 4.60E-09 |
| Glyur000180s00014071.2 | PF07058.6 | Myosin_HC-like | 1 | 29 | 8.40E-10 |
| Glyur000180s00014071.3 | PF07058.6 | Myosin_HC-like | 182 | 488 | 5.30E-116 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.909 |
| SRR1783600 | control | 3.947 |
| SRR1783602 | moderate drought stress | 3.729 |
| SRR1811619 | moderate drought stress | 3.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.638 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.613 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.129 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.010 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.095 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.301 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.716 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.679 |
| SRR2868004 | Drought Stress (root) | 8.220 |
| SRR2967015 | Control (root) | 8.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.279 |
| SRR9715740 | Leaf | 0.863 |
| SRR9715741 | Leaf | 1.686 |
| SRR9715739 | Root | 0.343 |
| SRR9715742 | Root | 2.609 |
| SRR9715743 | Root | 1.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.167 |
| SRR8749028 | MeJA induced 9h | 8.508 |
| SRR8749029 | MeJA induced 9h | 4.830 |
| SRR8749030 | Uninduced | 2.087 |
| SRR8749031 | Uninduced | 0.727 |
| SRR8749032 | Uninduced | 1.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.126 |
| SRR8400027 | Control - Root | 8.827 |