Gene detail information of Glyur000180s00014067


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47370.31.00E-60Ribosomal protein S10p/S20e family protein
NRKHN32450.11.97E-8240S ribosomal protein S20-2 [Glycine soja]
COGYP_006860896.12.00E-2230S ribosomal protein S10 [Candidatus Nitrososphaera gargensis Ga9.2]
Swissprottr|Q9STY6|RS202_ARATH3.00E-7740S ribosomal protein S20-2
trEMBLtr|I1M7C7|I1M7C7_SOYBN7.00E-83Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G04840.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00180135946138065-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome

GO:0015935  small ribosomal subunit


molecular_function

GO:0003723  RNA binding

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000180s00014067.1PF00338.17Ribosomal_S10231192.90E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control102.949
SRR1783600control103.637
SRR1783602moderate drought stress91.575
SRR1811619moderate drought stress90.317

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain194.347
DRR006520Root Summer glycyrrhizin high producing strain192.041
DRR006521Root Winter glycyrrhizin high producing strain106.663
DRR006522Root Winter glycyrrhizin high producing strain103.463
DRR006523Root Summer glycyrrhizin low producing strain166.192
DRR006524Root Summer glycyrrhizin low producing strain164.878
DRR006525Leaf Summer glycyrrhizin high producing strain51.037
DRR006526Leaf Summer glycyrrhizin high producing strain50.854

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)298.074
SRR2868004Drought Stress (root)167.240
SRR2967015Control (root)134.059

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf101.199
SRR9715740Leaf108.456
SRR9715741Leaf96.392
SRR9715739Root90.525
SRR9715742Root109.800
SRR9715743Root103.313

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h418.397
SRR8749028MeJA induced 9h131.313
SRR8749029MeJA induced 9h217.880
SRR8749030Uninduced44.081
SRR8749031Uninduced20.381
SRR8749032Uninduced49.721

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root164.843
SRR8400027Control - Root145.255

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved