Gene detail information of Glyur000180s00014050 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70720.1 | 4.00E-13 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | XP_004506604.1 | 2.76E-47 | PREDICTED: putative pectinesterase/pectinesterase inhibitor 26-like [Cicer arietinum] |
| Swissprot | tr|P17407|21KD_DAUCA | 2.00E-15 | 21 kDa protein (Precursor) |
| trEMBL | tr|A0A072UU39|A0A072UU39_MEDTR | 2.00E-47 | Plant invertase/pectin methylesterase inhibitor {ECO:0000313|EMBL:KEH29360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00180 | 52361 | 52669 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000180s00014050.1 | PF04043.10 | PMEI | 8 | 96 | 3.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.118 |
| SRR1783600 | control | 0.119 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.361 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.392 |
| SRR2868004 | Drought Stress (root) | 10.580 |
| SRR2967015 | Control (root) | 7.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.596 |
| SRR9715740 | Leaf | 0.291 |
| SRR9715741 | Leaf | 0.481 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.410 |
| SRR8400027 | Control - Root | 0.245 |