Gene detail information of Glyur000180s00014049 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62360.1 | 5.00E-26 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | AFK49039.1 | 2.38E-44 | unknown [Medicago truncatula] |
| Swissprot | tr|P17407|21KD_DAUCA | 7.00E-22 | 21 kDa protein (Precursor) |
| trEMBL | tr|I3T947|I3T947_MEDTR | 9.00E-45 | Uncharacterized protein {ECO:0000313|EMBL:AFK49039.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00180 | 43755 | 44807 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000180s00014049.1 | PF04043.10 | PMEI | 2 | 79 | 1.10E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.103 |
| SRR1783600 | control | 2.021 |
| SRR1783602 | moderate drought stress | 6.038 |
| SRR1811619 | moderate drought stress | 6.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.658 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 75.706 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 71.384 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.158 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.260 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 247.847 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 241.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.152 |
| SRR2868004 | Drought Stress (root) | 4.862 |
| SRR2967015 | Control (root) | 40.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 138.689 |
| SRR9715740 | Leaf | 80.566 |
| SRR9715741 | Leaf | 116.765 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.676 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.655 |
| SRR8749028 | MeJA induced 9h | 1.022 |
| SRR8749029 | MeJA induced 9h | 0.209 |
| SRR8749030 | Uninduced | 6.138 |
| SRR8749031 | Uninduced | 1.501 |
| SRR8749032 | Uninduced | 2.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.419 |
| SRR8400027 | Control - Root | 0.884 |