Gene detail information of Glyur000180s00014044 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61820.1 | 1.00E-118 | |
| NR | XP_004504713.1 | 0 | PREDICTED: uncharacterized protein LOC101499286 [Cicer arietinum] |
| trEMBL | tr|A0A072UNX5|A0A072UNX5_MEDTR | 0 | Stress up-regulated Nod 19 protein {ECO:0000313|EMBL:KEH31347.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00180 | 19819 | 25363 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000180s00014044.1 | PF07712.7 | SURNod19 | 29 | 429 | 6.40E-204 |
| Glyur000180s00014044.2 | PF07712.7 | SURNod19 | 29 | 408 | 5.80E-203 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.554 |
| SRR1783600 | control | 28.378 |
| SRR1783602 | moderate drought stress | 21.728 |
| SRR1811619 | moderate drought stress | 21.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.119 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.246 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.080 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.437 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.054 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.318 |
| SRR2868004 | Drought Stress (root) | 116.408 |
| SRR2967015 | Control (root) | 66.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.884 |
| SRR9715740 | Leaf | 36.574 |
| SRR9715741 | Leaf | 44.461 |
| SRR9715739 | Root | 59.743 |
| SRR9715742 | Root | 35.935 |
| SRR9715743 | Root | 44.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 237.179 |
| SRR8749028 | MeJA induced 9h | 1072.967 |
| SRR8749029 | MeJA induced 9h | 767.985 |
| SRR8749030 | Uninduced | 1227.286 |
| SRR8749031 | Uninduced | 1504.382 |
| SRR8749032 | Uninduced | 1039.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 171.961 |
| SRR8400027 | Control - Root | 105.982 |