Gene detail information of Glyur000179s00010718 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39250.1 | 3.00E-19 | RAD-like 1 |
| NR | XP_004509271.1 | 2.74E-41 | PREDICTED: protein RADIALIS-like 1-like [Cicer arietinum] |
| Swissprot | tr|F4JVB8|RADL1_ARATH | 2.00E-24 | Protein RADIALIS-like 1 |
| trEMBL | tr|I1MNE7|I1MNE7_SOYBN | 4.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G25250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 266861 | 268945 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.530 |
| SRR1783600 | control | 6.710 |
| SRR1783602 | moderate drought stress | 2.486 |
| SRR1811619 | moderate drought stress | 2.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.267 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.016 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.055 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.951 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.316 |
| SRR2868004 | Drought Stress (root) | 19.707 |
| SRR2967015 | Control (root) | 32.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.242 |
| SRR9715740 | Leaf | 24.015 |
| SRR9715741 | Leaf | 12.107 |
| SRR9715739 | Root | 2.436 |
| SRR9715742 | Root | 6.430 |
| SRR9715743 | Root | 5.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.846 |
| SRR8749028 | MeJA induced 9h | 5.853 |
| SRR8749029 | MeJA induced 9h | 3.295 |
| SRR8749030 | Uninduced | 1.450 |
| SRR8749031 | Uninduced | 4.320 |
| SRR8749032 | Uninduced | 1.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.435 |
| SRR8400027 | Control - Root | 29.516 |