Gene detail information of Glyur000179s00010716 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39250.1 | 6.00E-22 | RAD-like 1 |
| NR | KHN00535.1 | 1.13E-42 | hypothetical protein glysoja_000203 [Glycine soja] |
| Swissprot | tr|F4JVB8|RADL1_ARATH | 7.00E-28 | Protein RADIALIS-like 1 |
| trEMBL | tr|I1JCP4|I1JCP4_SOYBN | 4.00E-43 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G06240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 262898 | 263119 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.779 |
| SRR1783600 | control | 2.242 |
| SRR1783602 | moderate drought stress | 1.406 |
| SRR1811619 | moderate drought stress | 1.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.489 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.328 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.491 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.498 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 67.521 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 72.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.617 |
| SRR2868004 | Drought Stress (root) | 11.337 |
| SRR2967015 | Control (root) | 32.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.244 |
| SRR9715740 | Leaf | 13.230 |
| SRR9715741 | Leaf | 10.951 |
| SRR9715739 | Root | 2.173 |
| SRR9715742 | Root | 2.590 |
| SRR9715743 | Root | 1.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.676 |
| SRR8400027 | Control - Root | 24.276 |