Gene detail information of Glyur000179s00010715 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004509269.1 | 3.32E-32 | PREDICTED: late embryogenesis abundant protein 76-like [Cicer arietinum] |
| trEMBL | tr|G7LDY5|G7LDY5_MEDTR | 5.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:AET03900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 259763 | 261129 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.896 |
| SRR1783600 | control | 2.878 |
| SRR1783602 | moderate drought stress | 3.744 |
| SRR1811619 | moderate drought stress | 3.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.594 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.226 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.208 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.178 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.194 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.377 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.767 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.880 |
| SRR2868004 | Drought Stress (root) | 1.942 |
| SRR2967015 | Control (root) | 1.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.288 |
| SRR9715740 | Leaf | 9.318 |
| SRR9715741 | Leaf | 7.668 |
| SRR9715739 | Root | 1.083 |
| SRR9715742 | Root | 4.218 |
| SRR9715743 | Root | 3.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.064 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.006 |
| SRR8400027 | Control - Root | 2.876 |