Gene detail information of Glyur000179s00010711 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G18360.1 | 2.00E-66 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003520313.1 | 2.08E-129 | PREDICTED: epoxide hydrolase 4-like [Glycine max] |
| COG | YP_003207998.1 | 8.00E-14 | Carboxylesterase [Candidatus Methylomirabilis oxyfera] |
| trEMBL | tr|I1JCP7|I1JCP7_SOYBN | 8.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G06300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 234184 | 237483 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000179s00010711.1 | PF12697.2 | Abhydrolase_6 | 64 | 163 | 4.80E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.142 |
| SRR1783600 | control | 32.849 |
| SRR1783602 | moderate drought stress | 22.636 |
| SRR1811619 | moderate drought stress | 22.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.128 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.076 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.730 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.794 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.707 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 133.529 |
| SRR2868004 | Drought Stress (root) | 77.821 |
| SRR2967015 | Control (root) | 91.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.849 |
| SRR9715740 | Leaf | 0.657 |
| SRR9715741 | Leaf | 1.454 |
| SRR9715739 | Root | 91.367 |
| SRR9715742 | Root | 51.907 |
| SRR9715743 | Root | 62.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.873 |
| SRR8749028 | MeJA induced 9h | 5.239 |
| SRR8749029 | MeJA induced 9h | 6.068 |
| SRR8749030 | Uninduced | 13.411 |
| SRR8749031 | Uninduced | 20.699 |
| SRR8749032 | Uninduced | 16.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 219.813 |
| SRR8400027 | Control - Root | 206.834 |