Gene detail information of Glyur000179s00010704 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49560.1 | 1.00E-57 | Putative methyltransferase family protein |
| NR | XP_004509259.1 | 9.42E-136 | PREDICTED: protein-lysine methyltransferase METTL21A-like [Cicer arietinum] |
| COG | YP_004196037.1 | 5.00E-07 | methyltransferase-16, putative [Desulfobulbus propionicus DSM 2032] |
| trEMBL | tr|I1JCQ3|I1JCQ3_SOYBN | 1.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G06360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 206404 | 207216 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000179s00010704.1 | PF10294.4 | Methyltransf_16 | 51 | 230 | 4.00E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.704 |
| SRR1783600 | control | 4.652 |
| SRR1783602 | moderate drought stress | 3.441 |
| SRR1811619 | moderate drought stress | 3.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.264 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.247 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.174 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.466 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.536 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.139 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.891 |
| SRR2868004 | Drought Stress (root) | 14.861 |
| SRR2967015 | Control (root) | 14.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.937 |
| SRR9715740 | Leaf | 2.907 |
| SRR9715741 | Leaf | 5.771 |
| SRR9715739 | Root | 20.729 |
| SRR9715742 | Root | 12.520 |
| SRR9715743 | Root | 12.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.463 |
| SRR8749028 | MeJA induced 9h | 2.988 |
| SRR8749029 | MeJA induced 9h | 3.033 |
| SRR8749030 | Uninduced | 0.552 |
| SRR8749031 | Uninduced | 0.094 |
| SRR8749032 | Uninduced | 2.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.145 |
| SRR8400027 | Control - Root | 12.487 |