Gene detail information of Glyur000179s00010694 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20460.1 | 2.00E-11 | |
| NR | XP_004509251.1 | 5.86E-56 | PREDICTED: uncharacterized protein LOC101512887 [Cicer arietinum] |
| trEMBL | tr|K7K4E0|K7K4E0_SOYBN | 2.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G38165.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 154239 | 157135 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.735 |
| SRR1783600 | control | 28.971 |
| SRR1783602 | moderate drought stress | 36.475 |
| SRR1811619 | moderate drought stress | 36.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.319 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.604 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.988 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.108 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.260 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.903 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.793 |
| SRR2868004 | Drought Stress (root) | 12.781 |
| SRR2967015 | Control (root) | 14.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.006 |
| SRR9715740 | Leaf | 12.260 |
| SRR9715741 | Leaf | 9.255 |
| SRR9715739 | Root | 4.612 |
| SRR9715742 | Root | 6.250 |
| SRR9715743 | Root | 5.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.017 |
| SRR8749028 | MeJA induced 9h | 7.789 |
| SRR8749029 | MeJA induced 9h | 7.654 |
| SRR8749030 | Uninduced | 6.957 |
| SRR8749031 | Uninduced | 4.764 |
| SRR8749032 | Uninduced | 6.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.915 |
| SRR8400027 | Control - Root | 17.997 |