Gene detail

Gene detail information of Glyur000179s00010693

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25737.1	2.00E-123	Sulfite exporter TauE/SafE family protein
NR	XP_003527721.1	0	PREDICTED: uncharacterized protein LOC100789748 [Glycine max]
trEMBL	tr\|Q00M73\|Q00M73_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G04451.1}

Sequence

Transcript Sequence

>Glyur000179s00010693.1
ATGGCTTTAGAAGTTAATAATAGGAAGACTTCAAGAGCAACAGCAGCAGCAGCTATATNGCTAGTCTCATTGAGCCTTATTATGATCTACGATGTCAGTTCAGCAGAAAGAGTNTTGAAAGACTCAAAATCAGAAAATTTTCTTACGAGAGAAAGGCAAGGTGTTATAATTAGAGGAATTGATCTCTTCTGGCAGAGTGGAAAGTCTTCCTATGAACCTGTTTGGCCTGAAATGAAGTTTGGTTGGAGAATCATTGTGGGATCAATCGTGGGATTTTTNGGAGCAGCATTGGGCAGCGTAGGTGGGGTAGGAGGTGGAGGAATTTTCATCCCTATGCTCACTTTGATCATTGGTTTTGACCCAAAGTCTTCCACAGCCATCTCTAAGTGTATGATTACGGGAGCAGCTGGGTCAACTGTATATTACAACCTGAGGCTTAGACACCCAACACTAGACATGCCACTTATAGATTACGATCTGGCTTTGCTCTTCCAGCCTATGCTAATGCTAGGAATTAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTCACAGTTTTGCTTATCATCCTATTCATTGGTACATCCACCAAAGCTTTATTCAAAGGCATAGATACATGGAAAAAGGAAACAATTATGAAAAAGGAAGCAGCCAAGATGTTGGAATCAGATTCTACTCCTGGTTATGCTTCTGATGAAGACTACAAGTCACTACCAGGTGGCTCAGCTGATCAACAGGATGAGGAGGTCCCTTTACTAAAGAACATTTACTGGAAAGAATTACTAGTACTTGTGTATGTCTGGGTGGCTTTTCTTGTTGTTCAGATTATCAAGACATACAGCAAAACTTGCTCCATACAGTACTGGGTTCTTAATTCCTTGCAGGTGCCTATTGCAATCTCTGTTACACTTTTTGAAGCCATATGCTTATGCAAAGGAACTAGAGTGATTGCATCAAAGGGAAAGGAAATCACAGATTGGAAGTTTCATAAGATCTGTCTTTACTGTTCTTGTNGAATAATAGCTGGCATGGTAAGTGGACTACTTGGTCTAGGAGGTGGCTTCATTTTGGGGCCATTGTTTCTGGAATTGGGAATTCCCCCTCAGGTAGCTAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCTGTGGTACAATATTACCTTCTTGATCGCTTCCCAGTACCCTATGCTACATACTTAGTTCTAGTTGCAACCATAGCTGCATTGACTGGTCAGCATGTGGTGAGAAAGATAGTTGCTATCTTCGGTCGAGCATCTATCATCATCTTCATACTAGCATTCACCATTTTTGTGAGCGCAATCAGTTTAGGTGGGGTGGGAATAGANAACATGGTTGAGAAGATGGAAAATGAAGAGTATATGGGGTTTGACAATATCTGCCATCAATCTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00179	148659	152691	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000179s00010693.1	PF01925.14	TauE	89	205	3.40E-09
Glyur000179s00010693.1	PF01925.14	TauE	327	441	4.30E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.255
SRR1783600	control	9.482
SRR1783602	moderate drought stress	7.908
SRR1811619	moderate drought stress	7.758

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.559
DRR006520	Root Summer glycyrrhizin high producing strain	0.644
DRR006521	Root Winter glycyrrhizin high producing strain	0.361
DRR006522	Root Winter glycyrrhizin high producing strain	0.375
DRR006523	Root Summer glycyrrhizin low producing strain	0.269
DRR006524	Root Summer glycyrrhizin low producing strain	0.228
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.234
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.936

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.254
SRR2868004	Drought Stress (root)	0.103
SRR2967015	Control (root)	0.201

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.029
SRR9715740	Leaf	17.108
SRR9715741	Leaf	10.005
SRR9715739	Root	6.089
SRR9715742	Root	7.189
SRR9715743	Root	7.492

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.297
SRR8749028	MeJA induced 9h	0.187
SRR8749029	MeJA induced 9h	0.710
SRR8749030	Uninduced	0.358
SRR8749031	Uninduced	0.416
SRR8749032	Uninduced	1.129

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.699
SRR8400027	Control - Root	0.585