Gene detail information of Glyur000179s00010678 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23790.1 | 2.00E-37 | Protein of unknown function (DUF607) |
| NR | XP_004509238.1 | 6.13E-94 | PREDICTED: uncharacterized protein LOC101508599 [Cicer arietinum] |
| Swissprot | tr|O64823|MCU2_ARATH | 3.00E-57 | Calcium uniporter protein 2, mitochondrial (Precursor) |
| trEMBL | tr|B7FKA5|B7FKA5_MEDTR | 4.00E-86 | Uncharacterized protein {ECO:0000313|EMBL:AFK41656.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 49365 | 53309 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 69.837 |
| SRR1783600 | control | 69.619 |
| SRR1783602 | moderate drought stress | 84.785 |
| SRR1811619 | moderate drought stress | 85.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.804 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.815 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.525 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.093 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.516 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.108 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.839 |
| SRR2868004 | Drought Stress (root) | 39.647 |
| SRR2967015 | Control (root) | 42.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.955 |
| SRR9715740 | Leaf | 6.524 |
| SRR9715741 | Leaf | 10.768 |
| SRR9715739 | Root | 6.174 |
| SRR9715742 | Root | 12.991 |
| SRR9715743 | Root | 11.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.173 |
| SRR8749028 | MeJA induced 9h | 12.926 |
| SRR8749029 | MeJA induced 9h | 8.330 |
| SRR8749030 | Uninduced | 5.107 |
| SRR8749031 | Uninduced | 12.514 |
| SRR8749032 | Uninduced | 8.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.901 |
| SRR8400027 | Control - Root | 49.227 |