Gene detail information of Glyur000179s00010672 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDO84426.1 | 9.48E-28 | hypothetical protein CISIN_1g031748mg [Citrus sinensis] |
| trEMBL | tr|A0A067H9W7|A0A067H9W7_CITSI | 4.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:KDO84426.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 17761 | 18472 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.986 |
| SRR1783600 | control | 1.788 |
| SRR1783602 | moderate drought stress | 2.539 |
| SRR1811619 | moderate drought stress | 1.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.909 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.438 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.862 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.308 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.411 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.866 |
| SRR2868004 | Drought Stress (root) | 2.459 |
| SRR2967015 | Control (root) | 2.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.143 |
| SRR9715740 | Leaf | 0.920 |
| SRR9715741 | Leaf | 0.167 |
| SRR9715739 | Root | 0.714 |
| SRR9715742 | Root | 1.248 |
| SRR9715743 | Root | 1.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.698 |
| SRR8749028 | MeJA induced 9h | 3.072 |
| SRR8749029 | MeJA induced 9h | 2.884 |
| SRR8749030 | Uninduced | 0.762 |
| SRR8749031 | Uninduced | 0.374 |
| SRR8749032 | Uninduced | 1.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.060 |
| SRR8400027 | Control - Root | 2.512 |