Gene detail information of Glyur000179s00010671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36850.1 | 8.00E-37 | PQ-loop repeat family protein / transmembrane family protein |
| NR | AET03980.2 | 8.06E-91 | PQ-loop protein/transmembrane family protein [Medicago truncatula] |
| trEMBL | tr|G7LFJ3|G7LFJ3_MEDTR | 3.00E-91 | PQ-loop protein/transmembrane family protein {ECO:0000313|EMBL:AET03980.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 11839 | 16623 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.627 |
| SRR1783600 | control | 10.922 |
| SRR1783602 | moderate drought stress | 17.412 |
| SRR1811619 | moderate drought stress | 17.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.757 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.082 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.080 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.698 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.167 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.372 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.091 |
| SRR2868004 | Drought Stress (root) | 14.777 |
| SRR2967015 | Control (root) | 17.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.335 |
| SRR9715740 | Leaf | 3.321 |
| SRR9715741 | Leaf | 4.408 |
| SRR9715739 | Root | 3.509 |
| SRR9715742 | Root | 10.066 |
| SRR9715743 | Root | 8.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.305 |
| SRR8749028 | MeJA induced 9h | 12.046 |
| SRR8749029 | MeJA induced 9h | 7.896 |
| SRR8749030 | Uninduced | 14.536 |
| SRR8749031 | Uninduced | 8.870 |
| SRR8749032 | Uninduced | 33.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.174 |
| SRR8400027 | Control - Root | 12.570 |