Gene detail information of Glyur000178s00013224 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G42725.1 | 8.00E-36 | Putative membrane lipoprotein |
| NR | NP_001236268.1 | 1.98E-120 | uncharacterized protein LOC100306012 [Glycine max] |
| trEMBL | tr|C6SXK9|C6SXK9_SOYBN | 7.00E-121 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13982.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 246767 | 247399 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.855 |
| SRR1783600 | control | 22.239 |
| SRR1783602 | moderate drought stress | 23.825 |
| SRR1811619 | moderate drought stress | 23.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.220 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.189 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.391 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.108 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.584 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 59.809 |
| SRR2868004 | Drought Stress (root) | 13.981 |
| SRR2967015 | Control (root) | 32.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.523 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 1.966 |
| SRR9715739 | Root | 66.935 |
| SRR9715742 | Root | 17.477 |
| SRR9715743 | Root | 28.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 77.852 |
| SRR8749028 | MeJA induced 9h | 46.153 |
| SRR8749029 | MeJA induced 9h | 63.267 |
| SRR8749030 | Uninduced | 4.421 |
| SRR8749031 | Uninduced | 2.847 |
| SRR8749032 | Uninduced | 19.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 74.970 |
| SRR8400027 | Control - Root | 59.744 |