Gene detail information of Glyur000178s00013221 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G43850.1 | 9.00E-17 | |
| NR | XP_006593953.1 | 6.84E-95 | PREDICTED: uncharacterized protein LOC100798890 [Glycine max] |
| trEMBL | tr|I1LY62|I1LY62_SOYBN | 3.00E-95 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G17030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 234009 | 236725 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.224 |
| SRR1783600 | control | 27.431 |
| SRR1783602 | moderate drought stress | 28.511 |
| SRR1811619 | moderate drought stress | 28.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.840 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 108.618 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 104.941 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.622 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.929 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.635 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.968 |
| SRR2868004 | Drought Stress (root) | 18.397 |
| SRR2967015 | Control (root) | 24.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.190 |
| SRR9715740 | Leaf | 51.056 |
| SRR9715741 | Leaf | 37.817 |
| SRR9715739 | Root | 30.458 |
| SRR9715742 | Root | 31.155 |
| SRR9715743 | Root | 30.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.680 |
| SRR8749028 | MeJA induced 9h | 16.918 |
| SRR8749029 | MeJA induced 9h | 20.744 |
| SRR8749030 | Uninduced | 16.318 |
| SRR8749031 | Uninduced | 14.697 |
| SRR8749032 | Uninduced | 15.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.185 |
| SRR8400027 | Control - Root | 30.321 |