Gene detail information of Glyur000178s00013213 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G05920.1 | 0 | Subtilase family protein |
| NR | XP_003609994.1 | 0 | Subtilisin-like protease [Medicago truncatula] |
| COG | YP_003148385.1 | 7.00E-112 | cell wall-binding protein [Kytococcus sedentarius DSM 20547] |
| Swissprot | tr|O65351|SUBL_ARATH | 0 | Subtilisin-like protease (Precursor) |
| trEMBL | tr|G7JT67|G7JT67_MEDTR | 0 | Subtilisin-like serine protease {ECO:0000313|EMBL:AES92191.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 179325 | 182223 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000178s00013213.1 | PF05922.11 | Inhibitor_I9 | 30 | 104 | 2.90E-13 |
| Glyur000178s00013213.1 | PF00082.17 | Peptidase_S8 | 132 | 612 | 4.80E-41 |
| Glyur000178s00013213.1 | PF02225.17 | PA | 378 | 463 | 1.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 95.593 |
| SRR1783600 | control | 95.790 |
| SRR1783602 | moderate drought stress | 16.377 |
| SRR1811619 | moderate drought stress | 16.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.483 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.429 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.610 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.704 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.666 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.511 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.079 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.478 |
| SRR2868004 | Drought Stress (root) | 7.266 |
| SRR2967015 | Control (root) | 5.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.246 |
| SRR9715740 | Leaf | 1.906 |
| SRR9715741 | Leaf | 2.743 |
| SRR9715739 | Root | 10.469 |
| SRR9715742 | Root | 4.761 |
| SRR9715743 | Root | 6.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.441 |
| SRR8749028 | MeJA induced 9h | 2.004 |
| SRR8749029 | MeJA induced 9h | 1.995 |
| SRR8749030 | Uninduced | 0.848 |
| SRR8749031 | Uninduced | 1.718 |
| SRR8749032 | Uninduced | 1.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.247 |
| SRR8400027 | Control - Root | 15.501 |