Gene detail information of Glyur000178s00013205 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19110.1 | 0 | inter-alpha-trypsin inhibitor heavy chain-related |
| NR | XP_004508009.1 | 0 | PREDICTED: uncharacterized protein LOC101514299 [Cicer arietinum] |
| COG | YP_007069316.1 | 1.00E-35 | serine/threonine protein kinase [Leptolyngbya sp. PCC 7376] |
| trEMBL | tr|G7JT63|G7JT63_MEDTR | 0 | Inter-alpha-trypsin inhibitor heavy chain-like protein {ECO:0000313|EMBL:AES92187.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 147664 | 153169 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000178s00013205.1 | PF00092.23 | VWA | 331 | 485 | 4.20E-20 |
| Glyur000178s00013205.2 | PF00092.23 | VWA | 326 | 480 | 4.10E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.865 |
| SRR1783600 | control | 4.950 |
| SRR1783602 | moderate drought stress | 5.307 |
| SRR1811619 | moderate drought stress | 5.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.768 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.734 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.856 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.520 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.238 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.888 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.718 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.128 |
| SRR2868004 | Drought Stress (root) | 23.148 |
| SRR2967015 | Control (root) | 16.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.413 |
| SRR9715740 | Leaf | 12.701 |
| SRR9715741 | Leaf | 15.639 |
| SRR9715739 | Root | 1.219 |
| SRR9715742 | Root | 10.278 |
| SRR9715743 | Root | 7.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.638 |
| SRR8749028 | MeJA induced 9h | 25.546 |
| SRR8749029 | MeJA induced 9h | 26.357 |
| SRR8749030 | Uninduced | 16.145 |
| SRR8749031 | Uninduced | 20.145 |
| SRR8749032 | Uninduced | 16.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.804 |
| SRR8400027 | Control - Root | 27.105 |