Gene detail information of Glyur000178s00013194 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20700.1 | 2.00E-29 | Protein of unknown function (DUF581) |
| NR | KHN17740.1 | 6.08E-123 | hypothetical protein glysoja_005937 [Glycine soja] |
| trEMBL | tr|C6TCK1|C6TCK1_SOYBN | 2.00E-122 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 91332 | 92861 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000178s00013194.1 | PF04570.9 | DUF581 | 158 | 206 | 5.10E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 180.876 |
| SRR1783600 | control | 180.306 |
| SRR1783602 | moderate drought stress | 187.621 |
| SRR1811619 | moderate drought stress | 186.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 179.436 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 177.650 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 253.581 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 245.037 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 70.899 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 71.088 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 59.234 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 58.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 128.770 |
| SRR2868004 | Drought Stress (root) | 165.259 |
| SRR2967015 | Control (root) | 107.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.057 |
| SRR9715740 | Leaf | 47.069 |
| SRR9715741 | Leaf | 45.017 |
| SRR9715739 | Root | 17.357 |
| SRR9715742 | Root | 48.718 |
| SRR9715743 | Root | 45.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.732 |
| SRR8749028 | MeJA induced 9h | 59.450 |
| SRR8749029 | MeJA induced 9h | 53.146 |
| SRR8749030 | Uninduced | 30.907 |
| SRR8749031 | Uninduced | 44.625 |
| SRR8749032 | Uninduced | 74.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 210.100 |
| SRR8400027 | Control - Root | 204.123 |